Gene Pnap_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0717 
Symbol 
ID4686273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp758931 
End bp759497 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content55% 
IMG OID639833711 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_980957 
Protein GI121603628 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.24109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCAACGCCAC GTCAACCCGC CCTTATCTGA TACGTGCCTT GTACGAATGG 
TGTACCGACA ACGGCTTTAC GCCTTATGTG GCCGTGTCGG TCGATAACAC CGTGCAGGTG
CCGCGCGAGT ATGTCAAAAA CAACGAGATC GTACTTAATA TCGGCTTTGA CGCGACCAGT
TCGCTGACGC TGGGTAACGA ATTCATCGAG TTCAAGGCGC GTTTCGGTGG AAGCGCCCGG
GAAATACTGG TACCCATCAG TCATGTGATT GCCATCTATG CCCGTGAAAA CGGGCAAGGT
ATGGCCTTTC CTTTTGAAAC AAGCCCCGAA GGGCTTGCCG GCGCCAATGA TTCACAGACA
ATTGCGCCTG CAGCGTCTGG TCGAGACACT AAACCGGCAG CGATAGAAGA AGCTCCTTCG
GAAACGCCTG ACAGCAAGAT CATGCAGTTG GTGGAAAACG TGCCAGACAG TTCCGCTGCC
GGCTCGGGCA AGCAGAAAAA AACAGACGTA CCCGACCCCC CCAAACCGCC ATCACGCCCA
CGGCCCTCGC TCAAACGAGT GAAGTAG
 
Protein sequence
MNAPNATSTR PYLIRALYEW CTDNGFTPYV AVSVDNTVQV PREYVKNNEI VLNIGFDATS 
SLTLGNEFIE FKARFGGSAR EILVPISHVI AIYARENGQG MAFPFETSPE GLAGANDSQT
IAPAASGRDT KPAAIEEAPS ETPDSKIMQL VENVPDSSAA GSGKQKKTDV PDPPKPPSRP
RPSLKRVK