| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0709 |
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| Symbol | |
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| ID | 4688126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 751379 |
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| End bp | 752545 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833703 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_980949 |
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| Protein GI | 121603620 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.675227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA CCTGGCTCCT GTTTTCCCAG ACCGTCACTA TTTTGGTGGC GGCTTATTTC
GTGGTTGCCA CGCTGCAGCC GCAGTGGCTG AATAAGCGAA CCTCGCTGGG CGGCGTGTCG
GTCATCGAGG CACCGTCCAG CAGCGTGCCA CGTGCCATTG GTTCATCCAG TCCAGCCGGC
AGTTTCGCTG CGGCGGCAAA AATAGCCTCG GCGGCCGTGG TGAGCATCAA CACCAGCAAG
GCCGCCGTCA AAAACCCGCA AATGAACGAC CCCTGGTTCC GGTTTTTCTT TGGCGACCAG
AATCCGGGCG AAGCCCAGGC CGGACTGGGC AGCGGCGTGA TCGTCAGCGG CAGCGGCTAC
ATCCTGACCA ACAACCATGT GGTTGAAGGC GCCGACGAGA TCGAGGTGGT CCTCAACGAC
ACCCGCAAGG CCAAGGCCAA GGTGATTGGC ACCGATCCCG ACACCGACCT GGCGATTGTC
AAGATCGAGC TGGACAAGCT GCCCGTCATC GTGCTGGGCA ACTCGGACGC GCTGCAGGTG
GGCGATCCGG TGCTGGCCAT CGGCAACCCG TTTGGCGTCG GCCAGACCGT GACCGGCGGC
ATCGTGAGCG CGCTGGGACG CAACCAGCTG GGCATCAACA CCTTCGAGAA CTTCATCCAG
ACCGATGCGG CCATCAACCC AGGCAACTCG GGCGGCGCGC TGGTCGATGT GAACGGCAAC
CTGCTGGGCA TCAACACGGC GATTTACTCC CGCTCGGGTG GCTCCATGGG CATTGGTTTT
GCCATTCCCG TTTCGACCGC CAAGCAGGTG CTCGAAGGCA TCGTGAAAGA TGGCCAGGTC
ACGCGCGGCT GGATTGGCGT CGAACCGCAA GAACTCAACG CCGAACTGAT CGAAGCCTTC
AAGCTCAAAC CGGAGGCGGC CAAGGCGGGC GGCGTCATCA TCACCGGCGT GCTGCAAAAC
GGCCCGGCCG CCCAGGGCGG GATCCGGCCC GGCGACGTGA TCACGGCGGT CAATGGCCAG
CCAGTCGGCA ATGTGAGCCA GTTGCTGACG GCCGTGGCCG CACTCAAGCC CGGCGTCCCC
GCCCCGATGA CGGTGCTGCG CGACAATGGC CCGGTCGAGA TTGCGGTGAC GCCCGGCAAG
CGCGAGCGGC CCCGGGTTCA GCGCTGA
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| Protein sequence | MKRTWLLFSQ TVTILVAAYF VVATLQPQWL NKRTSLGGVS VIEAPSSSVP RAIGSSSPAG
SFAAAAKIAS AAVVSINTSK AAVKNPQMND PWFRFFFGDQ NPGEAQAGLG SGVIVSGSGY
ILTNNHVVEG ADEIEVVLND TRKAKAKVIG TDPDTDLAIV KIELDKLPVI VLGNSDALQV
GDPVLAIGNP FGVGQTVTGG IVSALGRNQL GINTFENFIQ TDAAINPGNS GGALVDVNGN
LLGINTAIYS RSGGSMGIGF AIPVSTAKQV LEGIVKDGQV TRGWIGVEPQ ELNAELIEAF
KLKPEAAKAG GVIITGVLQN GPAAQGGIRP GDVITAVNGQ PVGNVSQLLT AVAALKPGVP
APMTVLRDNG PVEIAVTPGK RERPRVQR
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