| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0700 |
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| Symbol | |
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| ID | 4688248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 746283 |
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| End bp | 747023 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833694 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_980940 |
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| Protein GI | 121603611 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.347674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTCA TCCCCGCGAT TGACCTCAAA GACGGTCACT GCGTCCGCCT GAAACAAGGC
GACATGGACC AGTCCACCAT TTTCAGTGAA GACCCGGCGG CCATGGCGCG CAACTGGGTT
GACAAGGGGG CGCGCCGGCT GCACCTGGTC GATCTGAACG GCGCGTTCGC GGGCAAGCCC
AAGAATGAAG CGGCCATCAA GCGCATCCTG GCCGAGGTGG GCAGCGAAAT CGACGTGCAG
CTGGGCGGCG GGATTCGCGA CCTGGACACC ATCGAGCGCT ACCTTGATGC CGGCCTGCGC
TACGTCATCA TCGGCACCGC CGCCGTGAAG AACCCGGGCT TCCTGCAGGA CGCCTGCACC
GCCTTTGGCG GCCACATCAT CGTCGGGCTG GACGCCAAAG ACGGCCGCGT CGCCACCGAC
GGCTGGAGCA AGCTGACCGG GCATGAAGTG GTCGATCTGG CCAAGAAATT TCAGGACTAC
GGCGTCGAGT CCATCATCTA CACCGACATC GGCCGCGACG GGATGCTCAG CGGCATCAAC
ATCCAGGCCA CCGTCAAGCT CGCGCAAGCG CTGACGATCC CGGTGATCGC CTCGGGCGGC
CTGTCGAACA TGGCCGACAT CGACGCGCTG TGCGCCGTCG AGGACGAGGG CGTGCAGGGC
GTGATCTGCG GCCGCTCGAT CTACAGCGGC GACCTGGATT TTGAAGCGGC TCAAGAGCGC
GCTGACGAAC TCAACGGCTA G
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| Protein sequence | MLLIPAIDLK DGHCVRLKQG DMDQSTIFSE DPAAMARNWV DKGARRLHLV DLNGAFAGKP
KNEAAIKRIL AEVGSEIDVQ LGGGIRDLDT IERYLDAGLR YVIIGTAAVK NPGFLQDACT
AFGGHIIVGL DAKDGRVATD GWSKLTGHEV VDLAKKFQDY GVESIIYTDI GRDGMLSGIN
IQATVKLAQA LTIPVIASGG LSNMADIDAL CAVEDEGVQG VICGRSIYSG DLDFEAAQER
ADELNG
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