Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0682 |
Symbol | |
ID | 4689750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 726827 |
End bp | 727525 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639833676 |
Product | hypothetical protein |
Protein accession | YP_980922 |
Protein GI | 121603593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.349284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.584525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTC TTCCCCGCCT TACCGTTCCC GGTCATCCGC ACCACATCGT CCAGCGCGGC AATAACCGGC AGGCGATTTT TTCATCGACA GCCGACTACC AGATGCTGCT GGCGCTTCTG GATGAAAACG CGCAAAAGTT CGGTGTTGCG CTGCATGCCT ATGTGCTGAT GGGCAACCAT TTCCATCTGC TTGCCACACC CAGCACCGAA GAGGGCTTGC CGCGCATGAT GCAGGCGGTC GGCCGGCGGT ATGTACGCTA TTTCAATGAC AGCCAAGGCC GTTCGGGCAC CCTGTGGGAA GGGCGCTACC GCTCGACGGT GATAGATCCC GACCGCTATT TGCTGGCCTG CATGGCTTAT ATCGACCTCA ACCCGGTGCG CGCTGGTCTG GTCAAAGAGG CTGCGCTCTA TCCCTGGTCC AGTCATGCGC GCTACGTGGG CTTGCGGACC GACAAGATGG TCACGCCGCA TGCACTGTTC TGGGCTCTGG GCAACACCCC ATTTTCGCGC GAAGCGGCTT ATGCCGAACT GGTCGCCCAA GGCATCACGC CGGTTCAGCA GGAGGCACTG ACTCAATCCG TACTCGGTGG CTGGGCGCTT GGTGATGAAA ACTTTGTTGT GAATTTGCAA AAGCAGACAA ATCGCCGCGT AAAAAAGACC TTGGCTGGAC GACCTTTAGG GCTGGAAAAA TCAAGCTAA
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Protein sequence | MARLPRLTVP GHPHHIVQRG NNRQAIFSST ADYQMLLALL DENAQKFGVA LHAYVLMGNH FHLLATPSTE EGLPRMMQAV GRRYVRYFND SQGRSGTLWE GRYRSTVIDP DRYLLACMAY IDLNPVRAGL VKEAALYPWS SHARYVGLRT DKMVTPHALF WALGNTPFSR EAAYAELVAQ GITPVQQEAL TQSVLGGWAL GDENFVVNLQ KQTNRRVKKT LAGRPLGLEK SS
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