Gene Pnap_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0682 
Symbol 
ID4689750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp726827 
End bp727525 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID639833676 
Producthypothetical protein 
Protein accessionYP_980922 
Protein GI121603593 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.584525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTC TTCCCCGCCT TACCGTTCCC GGTCATCCGC ACCACATCGT CCAGCGCGGC 
AATAACCGGC AGGCGATTTT TTCATCGACA GCCGACTACC AGATGCTGCT GGCGCTTCTG
GATGAAAACG CGCAAAAGTT CGGTGTTGCG CTGCATGCCT ATGTGCTGAT GGGCAACCAT
TTCCATCTGC TTGCCACACC CAGCACCGAA GAGGGCTTGC CGCGCATGAT GCAGGCGGTC
GGCCGGCGGT ATGTACGCTA TTTCAATGAC AGCCAAGGCC GTTCGGGCAC CCTGTGGGAA
GGGCGCTACC GCTCGACGGT GATAGATCCC GACCGCTATT TGCTGGCCTG CATGGCTTAT
ATCGACCTCA ACCCGGTGCG CGCTGGTCTG GTCAAAGAGG CTGCGCTCTA TCCCTGGTCC
AGTCATGCGC GCTACGTGGG CTTGCGGACC GACAAGATGG TCACGCCGCA TGCACTGTTC
TGGGCTCTGG GCAACACCCC ATTTTCGCGC GAAGCGGCTT ATGCCGAACT GGTCGCCCAA
GGCATCACGC CGGTTCAGCA GGAGGCACTG ACTCAATCCG TACTCGGTGG CTGGGCGCTT
GGTGATGAAA ACTTTGTTGT GAATTTGCAA AAGCAGACAA ATCGCCGCGT AAAAAAGACC
TTGGCTGGAC GACCTTTAGG GCTGGAAAAA TCAAGCTAA
 
Protein sequence
MARLPRLTVP GHPHHIVQRG NNRQAIFSST ADYQMLLALL DENAQKFGVA LHAYVLMGNH 
FHLLATPSTE EGLPRMMQAV GRRYVRYFND SQGRSGTLWE GRYRSTVIDP DRYLLACMAY
IDLNPVRAGL VKEAALYPWS SHARYVGLRT DKMVTPHALF WALGNTPFSR EAAYAELVAQ
GITPVQQEAL TQSVLGGWAL GDENFVVNLQ KQTNRRVKKT LAGRPLGLEK SS