| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0679 |
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| Symbol | aroB |
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| ID | 4689702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 723057 |
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| End bp | 724175 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833673 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_980919 |
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| Protein GI | 121603590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.241981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAA ATCCTCCTTC TCTCGCAACG GCCCAGGTGC AAATCAACCT GGCCGAACGC
AGCTATCCCA TCCTGATTGG CACTTCACTG CTGGCCAATG CACTGACCTA TCAGCATCTG
CCCCAAGCCG CAACGGCACT CGTGGTGTCC AACACGACCG TGGCGCCCCT GTACGCGGCG
CAATTGACTG AAGCGCTGCA GGCGCACTAC GGCAAGGTTC TGCTGGTGAC CCTGCCCGAT
GGCGAAGTCC ACAAGGACTG GCCGACCCTG CAACTGATTT TTGATGCGCT GCTTGAAAAC
GGCTGCGACC GCAAGACGGT GCTTTTCGCG CTCGGCGGCG GTGTGGTGGG CGACATGACC
GGCTTTGCGG CGGCCAGCTA CATGCGCGGC GTGCCGTTTG TGCAGGTGCC GACAACCCTG
CTGGCCCAGG TGGACTCGTC GGTCGGTGGC AAGACCGCGA TCAATCACCC GCTGGGCAAG
AACATGATTG GCGCGTTCTA CCAGCCCCAG CAGGTAATCT GCGACCTGGA GGTGCTGAAG
ACCTTGCCCG ACCGTGAACT GAGCGCCGGA CTGGCCGAAG TCATCAAGTA CGGGCCGATT
GCCGACATGG CCTTCCTCGA CTGGATCGAA GCCAACCTGG ATGCGCTGCT GGCCAAGGAG
CCTGCCGCGC TGGCGCACGC CATTCAGCGC AGCTGCGAGA TCAAGGCCTG GGTCGTCGGC
CAGGATGAGC GCGAGTCGGG TCTGCGGGCG ATTCTGAATT TCGGCCACAC CTTTGGCCAT
GCGATTGAAT CCGGGCTGGG CTATGGCGAA TGGCTGCACG GCGAAGGCGT GGGCTGCGGC
ATGGTGATGG CCGCGCACCT GTCGCAGCGC CTGGGCCGGA TTGACATGGC GTTTGTGCAG
CGCCTGACCA CGCTGATCCA GCGCGCCGGA CTGCCGGTCA AGGCGCCGCT GCTCTCAAGC
ACGGACAATG CAGGCCGCTA CCTCGACCTG ATGCGGATTG ACAAGAAATC CGAAGCCGGC
GAGATTCGCT TCGTGGTGAT TGATGGACCG GGCAAGGCCG CCGTGTGCGC CGCGCCCGAT
GCCGTGGTGC GTGAAGTCAT CGACTTGTGC TGCGCCTGA
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| Protein sequence | MQANPPSLAT AQVQINLAER SYPILIGTSL LANALTYQHL PQAATALVVS NTTVAPLYAA
QLTEALQAHY GKVLLVTLPD GEVHKDWPTL QLIFDALLEN GCDRKTVLFA LGGGVVGDMT
GFAAASYMRG VPFVQVPTTL LAQVDSSVGG KTAINHPLGK NMIGAFYQPQ QVICDLEVLK
TLPDRELSAG LAEVIKYGPI ADMAFLDWIE ANLDALLAKE PAALAHAIQR SCEIKAWVVG
QDERESGLRA ILNFGHTFGH AIESGLGYGE WLHGEGVGCG MVMAAHLSQR LGRIDMAFVQ
RLTTLIQRAG LPVKAPLLSS TDNAGRYLDL MRIDKKSEAG EIRFVVIDGP GKAAVCAAPD
AVVREVIDLC CA
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