| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0669 |
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| Symbol | |
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| ID | 4689207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 710569 |
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| End bp | 711855 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833663 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_980909 |
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| Protein GI | 121603580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.478543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.16835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGC CAGCCCTTCC CGGTCATCCC CATTTTGCGT ACCGTGACAA CGCGCTGTTT
GCCGAAGATG TGCGCGCCAG CGAACTGGCT GCGACCTACG GAACGCCTCT GTTCATCTAT
TCAAAAACCG CCATGCTGTC GGCGCTGGCG TCTTACCAGC GCGGTTTTGA AGGCCGGGAT
GCGCAAATTT GCTACGCCAT GAAGGCGAAC TCCTCATTGG CGGTGTTGCA GGTGTTCGCC
CGCGCGGACT GCGGCTTTGA CATCGTGTCG GGCGGCGAAC TCGAACGGGT TCAGGCTGCG
GGCGGTGATC TGAAGAAGGT CATTTTTTCC GGCGTCGGCA AAACCCGCGC CGAAATGTGC
CAGGCGCTGG CGGCCGGCAT TGGCTGCTTC AATGTCGAAA GCGAAGCCGA GCTGGATGTG
CTGTCGGAAG TGGCTGTTGC CATGAAGCTA AGGGCGCCGG TCAGCATCCG CGTCAATCCG
AATGTTGATC CGAAGACGCA CCCTTATATT TCAACCGGCC TGAAGGGCAA CAAGTTCGGC
GTCGCCCATG AGGATGCCCT GCGCATTTAC CAGCATGCCG CTTCGCTGGA AGGCCTGAAG
GTTGTCGGCA TTGATTGCCA TATCGGCTCG CAGATCACCG AGGTCACGCC GTACCTGGAT
GCGATGGACC GGGTGCTTGA CCTGGTGGCT GCGATTGAAG CGGCCGGCAT TGCGCTGGCG
CACATCGACT TTGGTGGCGG ACTGGGCATC AACTACAGCG CCGATGACAT GCCACCCGAA
GCGGACGCGC TGTGGCGGCA ACTGCTGGCC AAGCTGGACG CGCGCGGCTA TGGCGGCAAG
AAGCTGATGA TCGAGCCGGG CCGCTCGCTG GTCGGCAATG CCGGCATCTG CATCACCGAA
GTGCTCTACC TCAAGCCCGG CGAGCAGAAG AATTTCTGCA TCATCGACGC CGCCATGAAC
GACCTGCCCC GCCCGGCCAT GTACCAGGCT TTCCATGCCA TCGTTCCCGT CGAACGGGCC
GCAACGGAAA CTGCCGGCGT CATTTACGAC GTGGTGGGCC CGGTCTGCGA AAGCGGCGAC
TGGATCGGCC GTGACCGCAT CCTCGATGTG GCTGCCGGCG ATCAGTTGGC CGTCATGTCG
GCGGGGGCTT ATTGCATGAG CATGGCCAGC AACTACAACA CCCGCGGTCG CGCCGCCGAA
CTGCTGGTCG ATGGCGACCT GGCCCGGCTG ATTCGTGCGC GCGAAACGGC GGCGGATACG
TTCCGGGGCG AACTGTTGAT GCCTTGA
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| Protein sequence | MTLPALPGHP HFAYRDNALF AEDVRASELA ATYGTPLFIY SKTAMLSALA SYQRGFEGRD
AQICYAMKAN SSLAVLQVFA RADCGFDIVS GGELERVQAA GGDLKKVIFS GVGKTRAEMC
QALAAGIGCF NVESEAELDV LSEVAVAMKL RAPVSIRVNP NVDPKTHPYI STGLKGNKFG
VAHEDALRIY QHAASLEGLK VVGIDCHIGS QITEVTPYLD AMDRVLDLVA AIEAAGIALA
HIDFGGGLGI NYSADDMPPE ADALWRQLLA KLDARGYGGK KLMIEPGRSL VGNAGICITE
VLYLKPGEQK NFCIIDAAMN DLPRPAMYQA FHAIVPVERA ATETAGVIYD VVGPVCESGD
WIGRDRILDV AAGDQLAVMS AGAYCMSMAS NYNTRGRAAE LLVDGDLARL IRARETAADT
FRGELLMP
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