Gene Pnap_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0661 
Symbol 
ID4686656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp701410 
End bp702258 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID639833655 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_980901 
Protein GI121603572 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0888578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00380684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTGGT TATTCCGTTT TTTCTCCCAC TGGCCGCTGG CTGTGCTGCA TGCGCTGGGT 
GCCGGGCTGG GCTGGCTGGT CTGGCTGGCC AGCGCGCGTT ACCGGGCGCA CTTTCGGGCC
AATGTGGCGC AGGCGGGCCT GCCGTTTGAA GCGGCCCGGC CGGCGATTGC CGAGGCCGGG
CGTTTCGTCG GCGAGCTGCC CCGGCTGTGG ATGCGGCCAC GCTCCCAATC GTGCCTGGAA
AACGTCCGGG TGCAGGGCCA GGCCCATGCC GAGCAGGCTT TTGCGCAGGG TAAGGGCGTG
ATTTTTTTCG GTCCGCACTG CGGCAGTTTC GAGCTGGGGC CGCAGGCGCT GGCCGAGCTT
TACGGGCCGC TTACCGCCAT TTACCGTCCC GCCCGCAAGG CCTGGCTGGC CCGGCTCGAA
AGCTTCGCCC GTGACCGCCA AAACCTCACC GTGGTACCCG CCAGCCTCAG CGGCATCCGG
CTGATGCACC AAGCCCTCAA GGCCAACCAG GCGGTGGCCA TGCTGACCGA CCAGGTGCCG
CCCGAAGGCC TGGGAATCTG GGCGCCGTTT TTTGGCCGGC CCGCCTACAC CATGACGCTG
GCGGCCCGGC TGGCCTTGCA AAGCGGCGCG GCGCTGCTGC CGGTCAGCTG CGAGCGCCTG
CCCCGGGGCC GGGGTTATTT CCTGAAGATC TGGCCGGCGG TGGAGGGTCT GCAAACCCGC
GAAAAGGCCG ACATGCTGCA GGCTGTCACC CGGATCAACC AGGCGATTGA AGCCATCGTG
CTCAGCCAGC CGGGTCAGTA TCTGTGGGGC TACGCCCGCT ACAAGACACC GCGCAAGGAA
GCCGCTTGA
 
Protein sequence
MLWLFRFFSH WPLAVLHALG AGLGWLVWLA SARYRAHFRA NVAQAGLPFE AARPAIAEAG 
RFVGELPRLW MRPRSQSCLE NVRVQGQAHA EQAFAQGKGV IFFGPHCGSF ELGPQALAEL
YGPLTAIYRP ARKAWLARLE SFARDRQNLT VVPASLSGIR LMHQALKANQ AVAMLTDQVP
PEGLGIWAPF FGRPAYTMTL AARLALQSGA ALLPVSCERL PRGRGYFLKI WPAVEGLQTR
EKADMLQAVT RINQAIEAIV LSQPGQYLWG YARYKTPRKE AA