Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0661 |
Symbol | |
ID | 4686656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 701410 |
End bp | 702258 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833655 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_980901 |
Protein GI | 121603572 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0888578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00380684 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCTGGT TATTCCGTTT TTTCTCCCAC TGGCCGCTGG CTGTGCTGCA TGCGCTGGGT GCCGGGCTGG GCTGGCTGGT CTGGCTGGCC AGCGCGCGTT ACCGGGCGCA CTTTCGGGCC AATGTGGCGC AGGCGGGCCT GCCGTTTGAA GCGGCCCGGC CGGCGATTGC CGAGGCCGGG CGTTTCGTCG GCGAGCTGCC CCGGCTGTGG ATGCGGCCAC GCTCCCAATC GTGCCTGGAA AACGTCCGGG TGCAGGGCCA GGCCCATGCC GAGCAGGCTT TTGCGCAGGG TAAGGGCGTG ATTTTTTTCG GTCCGCACTG CGGCAGTTTC GAGCTGGGGC CGCAGGCGCT GGCCGAGCTT TACGGGCCGC TTACCGCCAT TTACCGTCCC GCCCGCAAGG CCTGGCTGGC CCGGCTCGAA AGCTTCGCCC GTGACCGCCA AAACCTCACC GTGGTACCCG CCAGCCTCAG CGGCATCCGG CTGATGCACC AAGCCCTCAA GGCCAACCAG GCGGTGGCCA TGCTGACCGA CCAGGTGCCG CCCGAAGGCC TGGGAATCTG GGCGCCGTTT TTTGGCCGGC CCGCCTACAC CATGACGCTG GCGGCCCGGC TGGCCTTGCA AAGCGGCGCG GCGCTGCTGC CGGTCAGCTG CGAGCGCCTG CCCCGGGGCC GGGGTTATTT CCTGAAGATC TGGCCGGCGG TGGAGGGTCT GCAAACCCGC GAAAAGGCCG ACATGCTGCA GGCTGTCACC CGGATCAACC AGGCGATTGA AGCCATCGTG CTCAGCCAGC CGGGTCAGTA TCTGTGGGGC TACGCCCGCT ACAAGACACC GCGCAAGGAA GCCGCTTGA
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Protein sequence | MLWLFRFFSH WPLAVLHALG AGLGWLVWLA SARYRAHFRA NVAQAGLPFE AARPAIAEAG RFVGELPRLW MRPRSQSCLE NVRVQGQAHA EQAFAQGKGV IFFGPHCGSF ELGPQALAEL YGPLTAIYRP ARKAWLARLE SFARDRQNLT VVPASLSGIR LMHQALKANQ AVAMLTDQVP PEGLGIWAPF FGRPAYTMTL AARLALQSGA ALLPVSCERL PRGRGYFLKI WPAVEGLQTR EKADMLQAVT RINQAIEAIV LSQPGQYLWG YARYKTPRKE AA
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