| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0649 |
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| Symbol | |
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| ID | 4686342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 687116 |
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| End bp | 688150 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639833643 |
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| Product | porin |
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| Protein accession | YP_980889 |
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| Protein GI | 121603560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000220947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.240142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GTTTTATCGC TTTGGCCGTA CTCGCCGCTT CCGGCGTCGC ATCAGCACAA
TCTTCCGTGA CGCTGTACGG TCTGGTCGAT GCGTACGTGG GCACCAGCAA GGTTAAAGTT
TCAGTACCAG GCGCCTCTTC ATCGTTGCGT CAGTCCGTGG TTGACAGCGG TGGTATCAAC
ACCAGCCGTT TTGGCTTCAA AGGTTCCGAG GATCTGGGTG GCGGTCTGAA AGCCAATTTC
GTGTTGGAAG GCGGCTTCAA GGCGGACACA GGTGCTACCG ATCCAACTGG TGGCTACACG
AACCCGTACA CAGGTGTTGT GTCAAGTTCC ACGTTCAGCC GCAATTCATG GGTCGGCTTG
TCGGGTGGTT TTGGCGAGGT CAAGCTCGGC AAAATGTGGA CGCCTTATGA CGAAGTCAAA
GGTTTGGGTG CAGCAGCGTT TGACGCCAAT ATCTTCGCGC CAGCAACCAA CGTCTGGTTG
AGCAACAACT ATCAAGCTAA TCCAGGCAAC GCGATTTACT ACTCGACGCC AAGTTTCAGC
GGTTTCAGCG CTGCCGGCAT GTACAGCTTC GGCGAAAACA AAGCTCCAGG CGTGGACGCT
GGCAAGATCA TGAGTGCGAA TGTTCAATAC GCGAACGGTC CAATCGCTGT AGCCCTTGCA
CACCAGGTTG AAAAAGCTAG TGGTGCTGTA GGTTCAACCA AGTTCACCCA GTTGAACGGC
TCGTATGACT TGGGTGCCGC GAAACTGCTG GCTGCGGTTG GCCATGTAAA AGATGGCAGC
GACAAGTCCA AGGAATTCCA GGTTGGCGTA GATGTGCCGT TGGGCGCAGT GACTGTGTCT
GGCGGTGTGG CTCGCGCCAA ACTGACCGGC CCCGGTGGTG AACTCAAGAG CACAGGTTTC
GGTTTGGCTG CCAAGTATGA CCTTTCCAAG CGCACCTTCT TGTACACGGG TCTGCAGTTG
TCCAAAAACG AAGTGGTTGG CGCTGGCGAC ATCAAGACCG ACACCTTCGC AGTGGGCGTT
CAGCACAAGT TCTAA
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| Protein sequence | MKKSFIALAV LAASGVASAQ SSVTLYGLVD AYVGTSKVKV SVPGASSSLR QSVVDSGGIN
TSRFGFKGSE DLGGGLKANF VLEGGFKADT GATDPTGGYT NPYTGVVSSS TFSRNSWVGL
SGGFGEVKLG KMWTPYDEVK GLGAAAFDAN IFAPATNVWL SNNYQANPGN AIYYSTPSFS
GFSAAGMYSF GENKAPGVDA GKIMSANVQY ANGPIAVALA HQVEKASGAV GSTKFTQLNG
SYDLGAAKLL AAVGHVKDGS DKSKEFQVGV DVPLGAVTVS GGVARAKLTG PGGELKSTGF
GLAAKYDLSK RTFLYTGLQL SKNEVVGAGD IKTDTFAVGV QHKF
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