Gene Pnap_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0635 
Symbol 
ID4686608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp673732 
End bp673983 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content62% 
IMG OID639833629 
Producttransglycosylase-associated protein 
Protein accessionYP_980875 
Protein GI121603546 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.325039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA TCTGGACCAT CATCATTGGA CTCATCGTCG GCATCGTCGC CAAATTCCTG 
ATGCCGGGCC GCGACCCGGG CGGCTTTGTC ATCACCGCCA TCATCGGCAT CGTCGGTTCG
GTCATCGCCA CCTACCTGGG CCGGGCGCTT GGCATGTACC GGCCCGGTGA GTCGGCGGGC
TTTATTGCCG CCGTCATTGG CGCGATCATT CTGCTGTTCC TCTACCGCAT GGTGGCGGGC
CGCAAAGCCT GA
 
Protein sequence
MSIIWTIIIG LIVGIVAKFL MPGRDPGGFV ITAIIGIVGS VIATYLGRAL GMYRPGESAG 
FIAAVIGAII LLFLYRMVAG RKA