Gene Pnap_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0625 
Symbol 
ID4686124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp661587 
End bp662594 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content51% 
IMG OID639833619 
Producthypothetical protein 
Protein accessionYP_980865 
Protein GI121603536 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.192003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAG ATGAGTGGCT GACGAAAAAC AAGTCAAACT TTGGCAGCGA TTATGAAATC 
CTGTTTGCAG AGACGGTATT GCCTCTGATC CCTGAACTCA GCTTTGATGC AGTTTCGGTG
CAGTATCCAT TTCAGGACGG GGACAGACGA CAGCGCTACT GCGATTTTGT CATCCATGAA
AATGAGGATG TTCGAATCGC AATCGAGATC GACGGCTATG ACAAGCGCGG TATGGGTACG
GGGATGTCCC ATGCAGATTT TGTTGACTGG CAGCGCCGAC AAGCGGCACT GACCTCACAA
GGCTGGTATG TGCTGCGCTT TGCTAACAGA GATGTCAGGG ACGAACCGAA CCGATGTGCA
GAACATATCA GCCTGCTGCT CAAGCGTTCA CAAAGCAAAT CCCAACGCAA GACATTAAGT
GCCAAGGAAA AGGAGCGACT GGACGCACTG ACCAAAGGCC AAAACGACAA AATCGAATAC
CTCAATAAAG AGACATCCGT CATGAAATAT ACCGTCGCGT CATTTACTGC CCTCATCCTC
ATGCTCGTGA TGGTGATCGT CTGGCAGAGT CGCGGGGGTT CATCCGGCCA GTCTCAGGCA
ACAGTGCAAA GCGCTACCAC CCCACTCCAG CCTGTAATGC TTTCTGCTTT ACCGGCTACT
GAGGTGCCCG TGCAGGTTCC TGAAGGTGCA ACCTGCGACA ACCCTATCAG TTGGCAACAG
GCTGGGCAGC ATATTGGTCA GACTGCAGCG GTAGTCGGTC CTTTGATGAA AGTAACTCAT
CGCGAGAATT CACGCGGCAA TCCCACATGG GTTGATGTAG GCGCGGTCTA TCCCAATGTC
CAGCGGCTGG TACTGGTAAT CTGGGGTAAA CAAAAACCAG ACTTCCCAAT GGTAAGGCCG
GGACAGTTAG AAGGGAGAAG TGTCTGCATC ATTGGGCAAA TCGAAAGCTA CAAAGGCATT
CCTCAGATCG AACTGAAAAC CGCGAGTCAA CTCAAGATAT TGCGGTAG
 
Protein sequence
MNLDEWLTKN KSNFGSDYEI LFAETVLPLI PELSFDAVSV QYPFQDGDRR QRYCDFVIHE 
NEDVRIAIEI DGYDKRGMGT GMSHADFVDW QRRQAALTSQ GWYVLRFANR DVRDEPNRCA
EHISLLLKRS QSKSQRKTLS AKEKERLDAL TKGQNDKIEY LNKETSVMKY TVASFTALIL
MLVMVIVWQS RGGSSGQSQA TVQSATTPLQ PVMLSALPAT EVPVQVPEGA TCDNPISWQQ
AGQHIGQTAA VVGPLMKVTH RENSRGNPTW VDVGAVYPNV QRLVLVIWGK QKPDFPMVRP
GQLEGRSVCI IGQIESYKGI PQIELKTASQ LKILR