Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0624 |
Symbol | |
ID | 4688182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 660757 |
End bp | 661482 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639833618 |
Product | deoxyribonuclease I |
Protein accession | YP_980864 |
Protein GI | 121603535 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00856225 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGCCAC CACCAACGAA TCAAACAAAG CAAGTTGAGA AGGCAGAAGT TGAGAAGCCA GAACTAGTCA ACAGCAAAAA AGAGATCGGA CACCGCGACT TTGCCAACGC AAAAAAAATA CTCCCTGAAG TTTTCGCAGG TTTGGAAGAA GATTTCTATT GTGGTTGTAC CTATTCAGGC AAGAAGGTTG ACCTGAATAG TTGCGGCTAT GTGCCGCGAA AGAACCAGAC GCGCGCAGAG CGCATCGAGT GGGAGCATGT GGTTCCAGCC TGGGTTTTGG GACATCAGCG TCAGTGCTGG CAACAAGGCG GACGAGATAA TTGCACAGCT TCAGATACAG AATTTAGTAA GGCAGAAGGC GATTTGAACA ATCTGGTGCC AGCCGTTGGC GAGGTCAATG GCGATCGTAG CAATTATTCC TATGGAGCCT GGAGCAACAA CCCGACGCCC ATTTATGGAA GTTGTAAAAC CGTCATCGAC TTTAAATTAA AGAGGGCTCA GCCACGCGAA GAAGTGCGCG GCAGGGCAGC GCGGATCACC CTCTACATGC ACGAAAAATA CAAATTAAAC ATGAGCCGGC AAGATCGCCA GTTGATGTGT GCATGGGCCA AACTTTATCC AGTAGATACC TGGGAACAAA CCCGCGATAA AAAAATTATT CGCTGGCAAG GGGAGGGCAA CCCTTTGGTA TCTGACCCGC AGCAGCTTTC TAGCCTTTGC CCTTAG
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Protein sequence | MQPPPTNQTK QVEKAEVEKP ELVNSKKEIG HRDFANAKKI LPEVFAGLEE DFYCGCTYSG KKVDLNSCGY VPRKNQTRAE RIEWEHVVPA WVLGHQRQCW QQGGRDNCTA SDTEFSKAEG DLNNLVPAVG EVNGDRSNYS YGAWSNNPTP IYGSCKTVID FKLKRAQPRE EVRGRAARIT LYMHEKYKLN MSRQDRQLMC AWAKLYPVDT WEQTRDKKII RWQGEGNPLV SDPQQLSSLC P
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