Gene Pnap_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0624 
Symbol 
ID4688182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp660757 
End bp661482 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID639833618 
Productdeoxyribonuclease I 
Protein accessionYP_980864 
Protein GI121603535 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00856225 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCCAC CACCAACGAA TCAAACAAAG CAAGTTGAGA AGGCAGAAGT TGAGAAGCCA 
GAACTAGTCA ACAGCAAAAA AGAGATCGGA CACCGCGACT TTGCCAACGC AAAAAAAATA
CTCCCTGAAG TTTTCGCAGG TTTGGAAGAA GATTTCTATT GTGGTTGTAC CTATTCAGGC
AAGAAGGTTG ACCTGAATAG TTGCGGCTAT GTGCCGCGAA AGAACCAGAC GCGCGCAGAG
CGCATCGAGT GGGAGCATGT GGTTCCAGCC TGGGTTTTGG GACATCAGCG TCAGTGCTGG
CAACAAGGCG GACGAGATAA TTGCACAGCT TCAGATACAG AATTTAGTAA GGCAGAAGGC
GATTTGAACA ATCTGGTGCC AGCCGTTGGC GAGGTCAATG GCGATCGTAG CAATTATTCC
TATGGAGCCT GGAGCAACAA CCCGACGCCC ATTTATGGAA GTTGTAAAAC CGTCATCGAC
TTTAAATTAA AGAGGGCTCA GCCACGCGAA GAAGTGCGCG GCAGGGCAGC GCGGATCACC
CTCTACATGC ACGAAAAATA CAAATTAAAC ATGAGCCGGC AAGATCGCCA GTTGATGTGT
GCATGGGCCA AACTTTATCC AGTAGATACC TGGGAACAAA CCCGCGATAA AAAAATTATT
CGCTGGCAAG GGGAGGGCAA CCCTTTGGTA TCTGACCCGC AGCAGCTTTC TAGCCTTTGC
CCTTAG
 
Protein sequence
MQPPPTNQTK QVEKAEVEKP ELVNSKKEIG HRDFANAKKI LPEVFAGLEE DFYCGCTYSG 
KKVDLNSCGY VPRKNQTRAE RIEWEHVVPA WVLGHQRQCW QQGGRDNCTA SDTEFSKAEG
DLNNLVPAVG EVNGDRSNYS YGAWSNNPTP IYGSCKTVID FKLKRAQPRE EVRGRAARIT
LYMHEKYKLN MSRQDRQLMC AWAKLYPVDT WEQTRDKKII RWQGEGNPLV SDPQQLSSLC
P