| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0623 |
|---|
| Symbol | |
|---|
| ID | 4686433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 660162 |
|---|
| End bp | 660608 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639833617 |
|---|
| Product | DNA/RNA endonuclease G NUC1-like protein |
|---|
| Protein accession | YP_980863 |
|---|
| Protein GI | 121603534 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.214808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGCA CTGCCGATGC CCGCTTGAGG CACACTGGCC CCCCTTCAAA GATATTCCCC
CGGTTTTCAT ACATGCTCCG TACCCTGGCT TTCTCCCTGA CCGTGCTGGC CGGCACCTCC
GTCCTGGCAA ACACCGCCTG TCCCCAGCAC TTTGCCGCCG GCCAGCGGCC TGTCGTCACC
AACCCCAAGA TGCAGCCGCG CACGCAGGAA CTCTGCTTCA AGGCCTTCGC GGTGCTGCAT
TCGGGCCTGA GCCGCACGCC GCTGTACGCG GCCGAGCACC TGACGCGCCA GAACATGAAG
AATGCGGCCA AGCTGTCGCG CAAGGATTCC TTTCATGCCG AGGACGCCCT GCCCGAGGGC
GACCGGGCCG AACTCAGCGA CTATGAACGC TCGGGCTACG ACCGTGGCCA CCTACAATAC
CCGGTAAAAA ATATACTCAT CAGCTAG
|
|---|
| Protein sequence | MACTADARLR HTGPPSKIFP RFSYMLRTLA FSLTVLAGTS VLANTACPQH FAAGQRPVVT
NPKMQPRTQE LCFKAFAVLH SGLSRTPLYA AEHLTRQNMK NAAKLSRKDS FHAEDALPEG
DRAELSDYER SGYDRGHLQY PVKNILIS
|
|---|
| |