| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0609 |
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| Symbol | |
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| ID | 4686764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 641306 |
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| End bp | 642568 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833603 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_980849 |
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| Protein GI | 121603520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.315746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACA GCTCGTCCTT GCACACACCG CCTCCTGACC CAGCCCAGTC GCCTCCGCAT
GAGTTGCAGA CACTCGGGCT GATGGCGTTT GGTTTTGCGC TGGTCAACCT TGACCGGTTC
ATCATGTACC CGCTGTTTCC AGTCATGGCC AGGGAACTTG GCCTGGACTA CCAGGACATT
GGCCTGATCT CGGCGGCTGT AGCGCTCACC TGGGGCCTGT CGTCCATGGT GTTCGGCCGG
CTGTCGGACC GGCTCGGAAG ACGCGGCATC CTGATCACCT CGGTGCTTGT CTTTTCGATA
CTGTGCGGCG CTACCGGCCT GGCCATGGGC CTGGGCAGTC TGCTGCTGAT CCGGGCGGTA
ATGGGCGTAT TCGAGGGCGC TTTTGTGCCG GCCAGCATCG CCGCTGTGGT CGATAGCAGC
CCTGCGGGGC GCGTTGGCCG CAACACCGGC CTTCAGCAGC TGATGGCGCC GCTGGTAGGC
AGTGCCCTGG CGCCAGTGCT GGCCATCGGG CTTTTGCAGG TGCTTCCGTC GTGGCGCTGG
GTGTTTGTCG TCACCGCACT GCCAGGGCTG CTTTGCGCCT GGCTCATCTT CCGCAAGCTT
GCCGAACCCG GACGCTCCCA ACCCTCACCA GGCCAGGCAC CAGCCATTCA GGCACCACTG
CGCACGGTGC TGGCCTGCCC GAATGTCGCC TTGTGCAGCG TCGGGTTCTG TTTCTGGCTG
GCACCGATAG TGATTTTTGG CTCGCTGATG CCCAGCTACC TGTCCGATCA TCTCCATCTG
GAACTCGGGC AGATGGGGCT GGTGATGTCC TCGCTTGGCG TGGGCGGCGC AGCAGGCATG
CTGGTGTTTC CGGCACTGTC GGATCGCTGG GGGCGCAAAA AAATGATGGT GAGCTGCCTG
GTCATGGCCA TGCTGCCGAC CTGGCTGCTG ATGCAGACAG GGGCCGAACC GCTGCGCCTG
TCGCTGCTGA TGTTCCTGGC TGCGGCCTTC ATTTCCGGCG TCATCGCCAT GGTGCATTCG
GTGACCGCCG ACAACGTGCC GGCGCAGCAT GTCTCGACCG CCACCGGCTT CATCATCGGT
GCCGGCGAGA TTGTGGGTGG CGCCATCGCG CCAGCTGTTG CCGGCGGGCT GGCCAAGGCC
ATGGGCATTG CTGCGATCCT GCCCTTTTCC CTGGGCTGCA TGGCAACGGG ACTGCTGCTG
GCAATCATGC TTCGCAGCCC CCGGCACAGC TCCATTCCCC AGGGAGCCGC CATGCAGAAC
TGA
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| Protein sequence | MTNSSSLHTP PPDPAQSPPH ELQTLGLMAF GFALVNLDRF IMYPLFPVMA RELGLDYQDI
GLISAAVALT WGLSSMVFGR LSDRLGRRGI LITSVLVFSI LCGATGLAMG LGSLLLIRAV
MGVFEGAFVP ASIAAVVDSS PAGRVGRNTG LQQLMAPLVG SALAPVLAIG LLQVLPSWRW
VFVVTALPGL LCAWLIFRKL AEPGRSQPSP GQAPAIQAPL RTVLACPNVA LCSVGFCFWL
APIVIFGSLM PSYLSDHLHL ELGQMGLVMS SLGVGGAAGM LVFPALSDRW GRKKMMVSCL
VMAMLPTWLL MQTGAEPLRL SLLMFLAAAF ISGVIAMVHS VTADNVPAQH VSTATGFIIG
AGEIVGGAIA PAVAGGLAKA MGIAAILPFS LGCMATGLLL AIMLRSPRHS SIPQGAAMQN
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