| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0607 |
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| Symbol | |
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| ID | 4687428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 638908 |
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| End bp | 639954 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833601 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_980847 |
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| Protein GI | 121603518 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAC GTTCCATGGC TTCCCTTGAT GGCTGTATCT CCGCCAGCTC GGCGCTGATG
TGGGAGGACG CAGTGCATAC CGGCATCGGC CGCATGCCGG CCGAGCTGCG CCATCAGGAG
GTCATACACC TCCTGCCGGT GGGCGCACAA GCCTTCAGCG GCCGCATCGA CTATGGTGAC
CTGGCTGGCA CCGGCCTGTG CCGCATGACG GCCAGCCCGC ACCGTTTTCA GCGCGCCCTG
CGTGAAGGCG CATCCCTTGC CGCCAGCCCG CTGATCCTCG TCATCCAGGT CAAGAACTCC
AGTTACTTCG AGCAGCGCGA ACGCAGCGGC ATGCTCAGCC CCGGCGACTG GTGCGTGCTG
GACACGTACC GGCCGTTCGG CTGGAACAGC GCATCGGGCT GCGAGCAGAT CATCATGACC
ATCCAGCGGC CGGCCGATTC GGGGCTGGGC GACCTGATCG CACGTGGCGC GGCGCAGCGC
TGCGATGGCA AGACCGGCGC GGCGCGCATT CTGCAGGCCA TGGTGAGCGA AGTGATGGGC
CAGATCCACC ACTTGGCGCC CTACAGCGCC GGATCACTGG CCAGCGCCCT GACGGCGACT
GCGTGGAATG CGCTGCAAGA GCAACTTGAG GCACCTGCTC CGATCCTGCT GCGCGACACC
CAATGCAGCC GGCTCAAGGC CTGGATTGAA ACGCGGCTGG CCGAGCCTGA TCTGTCGGTT
GACACGATAG CCCAGGGCTG CCGCATGTCG GCGCGCAGTG TTCACCGCGC CTTTTCCAGT
GACCCTACCG GCTCGGTTTC GAGCTATCTC TGGCAGCGCC GCGTGGTTCA GTGCGCCGCC
GCGCTGAAAA ACCCGCAGGA AATGCACCGC TCCATCACCG ACATCGCCCT GTCCTGGGGA
TTTTCAAGCT CGTCGCATTT CAGCCGGGTG TTCAGGAGCA CCCTGGGCGT GTCGCCACGC
AGCTACAGGG CCGGGGGCCA ACACGCTGAC TGGCTGGCGG CCTGGTCGGG GGTAGTTCCA
GAACCCGACC GCCCAAAGGC AAGCTGA
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| Protein sequence | MMSRSMASLD GCISASSALM WEDAVHTGIG RMPAELRHQE VIHLLPVGAQ AFSGRIDYGD
LAGTGLCRMT ASPHRFQRAL REGASLAASP LILVIQVKNS SYFEQRERSG MLSPGDWCVL
DTYRPFGWNS ASGCEQIIMT IQRPADSGLG DLIARGAAQR CDGKTGAARI LQAMVSEVMG
QIHHLAPYSA GSLASALTAT AWNALQEQLE APAPILLRDT QCSRLKAWIE TRLAEPDLSV
DTIAQGCRMS ARSVHRAFSS DPTGSVSSYL WQRRVVQCAA ALKNPQEMHR SITDIALSWG
FSSSSHFSRV FRSTLGVSPR SYRAGGQHAD WLAAWSGVVP EPDRPKAS
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