| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0603 |
|---|
| Symbol | |
|---|
| ID | 4688304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 635157 |
|---|
| End bp | 635624 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639833597 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_980843 |
|---|
| Protein GI | 121603514 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.125253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.477496 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTT CCCGCAAGTC CGCCCCTCCC AACCCCGCCG TCGAGACGGT GGACACGGCT
TTCCTCGAAA GCCTGATTGG TTACAACGCC CGCCGCGCGT CGCTGGCGAT TGTTGAAGTG
TTCATGGTGC GCATGGCGCC GTATGACTTG CGCATCGTCG ATTTTTCGAT GCTGTCGCTG
ATTGCGCACA ACCCGGGCAT CACCTCGCGC CAGCTCTGCG CCACCCTGGG CATCCTGCCG
CCCAACCTGG TGGGCCTGAT TGCTTCGCTG GAAAAACGCG AACTGATCGA ACGCCGCCCG
CACCCCCACG ACCGCCGCGC CGCCGGCCTG CACCTGAGCG CCCAGGGCGT GGAACTGGCC
CGGCAGGCCG AGCAGACCGC TGCCATGCTG GAAACAGAAG CCGCCGCCCG GCTCACCCCG
TCAGAGCGCA AGACCCTGAT GCGGCTGCTG CAGAAGATTT ACCGGTAA
|
|---|
| Protein sequence | MPSSRKSAPP NPAVETVDTA FLESLIGYNA RRASLAIVEV FMVRMAPYDL RIVDFSMLSL
IAHNPGITSR QLCATLGILP PNLVGLIASL EKRELIERRP HPHDRRAAGL HLSAQGVELA
RQAEQTAAML ETEAAARLTP SERKTLMRLL QKIYR
|
|---|
| |