Gene Pnap_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0600 
Symbol 
ID4686957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp632717 
End bp633355 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID639833594 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_980840 
Protein GI121603511 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.200875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.605092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GCGAACAAAT CACTCAACTG CGCGACCTTG GCGCGGCCAC GGTCTATGAG 
GCGCAAGGCG CCAAGGGCGC GCTCGACAGC GGCATGAAGC CCATCGATCC GACGACCCGA
TTGGCCGGCC CGGCCCTGAC GGTCGATGCC CGCCCTGGCG ACAACCTGAT CCTTCACTAC
GCCGTGCAGA AGGCCAGGCG CGGCGACGTG CTGGTTGTCG ATGCCAAGGG CTTCATGGAA
GCGGGTCCAT GGGGCGATGT GCTGACCCTC CAGGCGATGA AGCTCGGCAT CGCCGGCCTG
GTGATCAACG GCTGCGTGCG CGACGCCAAT CTGATCATCG GCCTCGGGTT TCCCGTGTTC
TGCCGTGGGC TGTCCATCAA GGGCACGGGC AAGAACCAGC CCGGCAAGGT CAACGTCCCG
GTCATGGTGG GCGACGTGTT GATCAATCCT GGCGACATCA TCGTTGGCGA CCGCGACGGC
CTGGTGGTGG TCGCCCAGGG CGAAGTCGCG ACGACCATCT CCAACAGCCT GGCCCGCGAA
GAAAAGGAAG AAAAGCAGCG CAAGGCAATC GATGAAGGCG CCACGACCGC TGAACTGCTC
AACCTGACGG ACACCCTGAC GCGCTTCGGC CTCGTCTGA
 
Protein sequence
MTTSEQITQL RDLGAATVYE AQGAKGALDS GMKPIDPTTR LAGPALTVDA RPGDNLILHY 
AVQKARRGDV LVVDAKGFME AGPWGDVLTL QAMKLGIAGL VINGCVRDAN LIIGLGFPVF
CRGLSIKGTG KNQPGKVNVP VMVGDVLINP GDIIVGDRDG LVVVAQGEVA TTISNSLARE
EKEEKQRKAI DEGATTAELL NLTDTLTRFG LV