Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0594 |
Symbol | |
ID | 4686723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 627285 |
End bp | 628640 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639833588 |
Product | putative transposase |
Protein accession | YP_980834 |
Protein GI | 121603505 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCG TGATTCCTGT CAGAACCAAT TGGCCTGAAG ATTTTCAGGA ATGGCTCCAG CCGTTCCTGG CCGTTTTCAC ACGTTCCGAG CAGCGCTGCT GGGCACCTCT CTACCTGCAA GGACTCCTGG GGCCGGGCGC GCGCAAAAGT GTCGCACCCA TGGCTGAACG TGTGTGTCCC GGTCAGACGC AGCAACTCCA CCATTTTGTG TCGTCATCGA CTTGGTCCAC CGCTCCGCTG GAACAGGTGC TGCGCAAGAA GGCTGACGCT TTGGTAGGCG GCAAGGACGC TGTGCTGATC GTGGACGACA CGGCGCTACC CAAGCAGGGC AAGCACTCGG TAGGGGTCAA GCGCCAACAC TGCGGCGTAC TCGGTAAGCA GGCTAACTGC CAGGTATTGG TATCGCTCAC CTTAGCGCGC AAGGAAGTGC CAGTGCCGAT CGCCCTGCGG CTGTACTTGC CCGAAGATTG GGCACAGGAC GAAGCGCGTC GTGCAGCAGC CAAGGTACCC GAGTCGATTA CGTTCGAGAC CAAGGGTGAC ATCGCGCTGG CGCAGATCGA TGCCGCGCTG GCTGACGGCG TGCGCTTTGG CATGGTGCTG GCCGATGCCG GCTATGGCAG TTCGGCAGGC TTTCGCGCTG GGCTTACGCA GCGAGGGCTA CGATGGGCAG TGGGCGTGCA GCCCACGCAG AAGGTCTATC CAGCTGATGT GCGGCTCGAT GTGCCGGCCG ATCCCCCGGT GGGGCGCCCC GCCAAGCACC CAAGACCTTC GACGCCGAGC GTGTCCGTCG TGCAGATGAT TGAAACGTTG GGTTCCAAGG CCCTGCGGCG CTGTTCCTGG CGCAGCGGCA CCAAGGGCAT GCTCAGCGCA CGCTTTGCTG CTGTGTGGGT GTGCGTTGCT GACGGCGCGC TGGTATCGCA TTGGCAGCAT CTTTCGGGGC AAGCCGCATG GCTGGTGTGC GAAGTGCGCT CCAGTGGCGA GCGCAAGTAT TACTTTACTA ACCATCCGGC TGACACGCCG CGCAGGACGC TGGTACGCGC GATCAAGGCC CGCTGGGCGT GCGAGCAGGC GCATCAGCAA CTCAAGGATG AACTTGGCCT GGACCATTAC GAAGGCAGAT CCTGGCTGGG ACTGCACCAT CACGCGCTGC TGACCATGAT GGCTTTTGGT TATCTGCAGC ACCGACGTCT GGACAGTGTT TTGCAAGCGG GAAAAAAAAC TGGCATCCAA TGCACCGGGA CCGCCACCGC AACCATCATT GCCAGCGGTA CGCCGGGCCA TTCTCGCCGC GCTTTGTCGG GTAATTTGCG TTCAGTGTCC TCATTGCGGC GCCACGATAA ACCTGCGTCA GCGTGA
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Protein sequence | MDTVIPVRTN WPEDFQEWLQ PFLAVFTRSE QRCWAPLYLQ GLLGPGARKS VAPMAERVCP GQTQQLHHFV SSSTWSTAPL EQVLRKKADA LVGGKDAVLI VDDTALPKQG KHSVGVKRQH CGVLGKQANC QVLVSLTLAR KEVPVPIALR LYLPEDWAQD EARRAAAKVP ESITFETKGD IALAQIDAAL ADGVRFGMVL ADAGYGSSAG FRAGLTQRGL RWAVGVQPTQ KVYPADVRLD VPADPPVGRP AKHPRPSTPS VSVVQMIETL GSKALRRCSW RSGTKGMLSA RFAAVWVCVA DGALVSHWQH LSGQAAWLVC EVRSSGERKY YFTNHPADTP RRTLVRAIKA RWACEQAHQQ LKDELGLDHY EGRSWLGLHH HALLTMMAFG YLQHRRLDSV LQAGKKTGIQ CTGTATATII ASGTPGHSRR ALSGNLRSVS SLRRHDKPAS A
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