| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0575 |
|---|
| Symbol | |
|---|
| ID | 4686266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 609455 |
|---|
| End bp | 611803 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639833570 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980816 |
|---|
| Protein GI | 121603487 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA AGGCGATATA TCTGTCAGTC ATGCTCGGCG TTCTGGCTGG GCCTGCAGTG
CTGGCGCAGA CCCAGGCGGT CGTTGACGCG GCCAGGTCCG CGCAAGGAGC GGCGCCCAAG
GCCTGGTCGG CCTACCAGCC GGTGCAGGCG CCGCAGGCGC CCGAGGTCAG GCAAAAGGCC
TGGGTGCGCA CGCCCATCGA CGCTTTCGTG CTGTCCCAGC TCGAAGCCAA GGGCCTCAAG
CCCTCGAAGG AGGCTGACCG GGCCACCTTC ATCCGGCGCG CCACGCTGGA CGCCTGGGGA
CTCTTGCCAA CGCCCGAGGA GGTCAAAACC TTCGTGGCCG ACAAGTCGCC CACGGCCTAT
GAAAAGCTGG CTGACCGCCT GCTGGCCTCG CCGCACTATG GCGAGCGGCA GGCGCGGCGC
TGGCTCGATC TGGCGCGCTA CGCCGACAGC ACGGGTTTTC AGAACGACAA CACCCGTCCG
AACAACTGGC GCTACCGCGA CTATGTGATC AAGGCCTTCA ACCAGGACCG GCCATTCAGC
CGCTTCATTC AGGAGCAGGT GGCCGGCGAC GAACTCTGGC CAGAAAGCCA GGACGCCAGG
ATTGCCACCG GCTTCCTGGC CGGCTACCCC GACAACCGCA ACTCGCGCGA CCTGGTGCAG
CGCAAGTACC AGATCGAGAC CGACATGACC GACTTGGTGG GCGAGACCTT CCTGGCCGCC
ACCGTCGGTT GCGCGCGCTG CCACAACCAC AAGTCCGACA AGGTCAGCCA GAAGGAATAT
TTTCAATTGC AGGCCTTCCT GGCCAACACG GCTTTCAATG AGCAGACGCC GCTGGCCAAG
GGCACTGAAA CCGAATGGGA CAAGGCCTAC GAGCAGCAGC AGGCGGCTTA CCAGGAGGCT
ACCAAGGACA TACGCGCCAA GCAAAAGGCC ATTCTCGACA CCGTGCGCGA GGCCGGACGC
AAGTACTACA ACGAGCGTTA CCTGACCGAC AGCCGCGAGG CGATCTTCAA GCCCGAGGCG
CAGTGGACGC CGCTGGACCG CTGGGTCAAC TGGCGCAAGC AGGCTGTGGC GACCGACAAT
GAAATCGCAA GCTATCTGGA AGACAGTGGC ACGAAACCGA GCGTTGTTTA CTACAACCCC
GACAACGCAG AGAAGTGGAA GACCTACAAG GCCCTGCGGG AAGAACTCAA GCAGTTCGAC
AAGATCAAGC CGGCCAAGGG GTCGAGCCAG TTCACCGCCG CGCTGGAACT GACCAAAGAA
GTGCCGCCCA CCCATGTGCG CTTCGGCGGC ATCCACGAGC GCCCGCTCGA AGCCGTGCAG
CCGGCCATTC CCGCGCTGTG GGGCGGCAAG GGTGAAGTGG CGATCACGCC GACCGCAAGC
TCATCGGGCA GGCGCACGGC GCTGGCCAAC TGGCTGAGCA GCGACAGCAA CCCGCTGACG
GCGCGCGTTT ATGCGAATCG CGTCTGGGCG CAGTACTTCG ACAAGGGCAT CATCTCCACG
GTGCAGGACT TCGGCCGCGC TGGAACCAAG CCGACGAACC CCGAGCTGCT CGACTACCTG
GCCACCAACT TCGTGAAAAA CGGCTGGAGC GTCAAGAAGC TGCACCGCGA AATCCTGCTG
TCCAGCGTCT ATCGCCAGTC GTCCGACGAG CGCCTGGACG TGGTCAAGGC CGATCCGGAA
AACAAGCTGC TGGCCTTCTA TCCGCGCAAG CGCCTGGAAG CCGAGGTGAT CCGCGACTCG
CTGCTGTATG CCTCGGGCCT GCTGAGCGAC AAGGTCGGTG GCCCTTCCGT GTTCCCGCCG
GTGGTCAAGA CCGGCGACGT GGTGGGCAAG GCGGAGGATT TCCAGGGCAA CCGCGTCTGG
GCTGTTTCGA CCGACAAGGA AGACTGGAAC CGCCGCAGCC TCTACATCTT CACGCGCCGC
AGCTTCAGCT ACCCGATCAC GCAGAACTTC GACCCGGCCA ACCCGAACCA GCCGCACCAC
AAGCGCGATG TGACGACCAC GGCGTTGCAG GCGTTGACGC TGTTCAACAG CGAGGTGGTG
TTCGACTGGT CACAGGCCCT GGCCGGACGC GTGATCAACG AGGCGGGCGG CGACGAGACG
GCGCAGATCA ACCGGCTCTA CCAGATCCTG TACTCACGCG AGCCCAACCA GACCGAGCGC
CTCGCGCTCA AGTCTTTCCT GGCCGAGCAA AAGATCGTGG TCCAGCACAA GGCGGCCAAC
GGCAAGTTCG AGGTGGCCGT GCCCTCCGGC CTGAAGGACA CCACGAAATT TGACCCGGTG
AAGTCCGCAG CGTTTGTCGA TCTGGTTCAC ACCGTCGCCA ATTCCAACGA GTTCGCCTAC
CGTTTCTGA
|
|---|
| Protein sequence | MKNKAIYLSV MLGVLAGPAV LAQTQAVVDA ARSAQGAAPK AWSAYQPVQA PQAPEVRQKA
WVRTPIDAFV LSQLEAKGLK PSKEADRATF IRRATLDAWG LLPTPEEVKT FVADKSPTAY
EKLADRLLAS PHYGERQARR WLDLARYADS TGFQNDNTRP NNWRYRDYVI KAFNQDRPFS
RFIQEQVAGD ELWPESQDAR IATGFLAGYP DNRNSRDLVQ RKYQIETDMT DLVGETFLAA
TVGCARCHNH KSDKVSQKEY FQLQAFLANT AFNEQTPLAK GTETEWDKAY EQQQAAYQEA
TKDIRAKQKA ILDTVREAGR KYYNERYLTD SREAIFKPEA QWTPLDRWVN WRKQAVATDN
EIASYLEDSG TKPSVVYYNP DNAEKWKTYK ALREELKQFD KIKPAKGSSQ FTAALELTKE
VPPTHVRFGG IHERPLEAVQ PAIPALWGGK GEVAITPTAS SSGRRTALAN WLSSDSNPLT
ARVYANRVWA QYFDKGIIST VQDFGRAGTK PTNPELLDYL ATNFVKNGWS VKKLHREILL
SSVYRQSSDE RLDVVKADPE NKLLAFYPRK RLEAEVIRDS LLYASGLLSD KVGGPSVFPP
VVKTGDVVGK AEDFQGNRVW AVSTDKEDWN RRSLYIFTRR SFSYPITQNF DPANPNQPHH
KRDVTTTALQ ALTLFNSEVV FDWSQALAGR VINEAGGDET AQINRLYQIL YSREPNQTER
LALKSFLAEQ KIVVQHKAAN GKFEVAVPSG LKDTTKFDPV KSAAFVDLVH TVANSNEFAY
RF
|
|---|
| |