| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0571 |
|---|
| Symbol | |
|---|
| ID | 4687365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 606183 |
|---|
| End bp | 606791 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639833566 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_980812 |
|---|
| Protein GI | 121603483 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.987746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC GGATTTTCAA GGCGGCCCTG CCCGCGCTCA TGTCCACCCT GCTGGCCCTG
CCGGCCGCCG CAGCACTGAA AGAAGGCGAT GCGGCGCCGG ACTTCAAGCT GAAAGCCTCT
CTGGCCGGCA AGGAGTTCAA TTACTCGCTG AAGGATGCGC TGAAAAAAGG CCCGGTGGTG
GTCTATTTCT ACCCGTCGGC CTACACCGGC GGCTGCAACA TTCAGGCCCG CAGTTTTGCC
GTGAACACGG AAAAGTTCGC GGCAGCGGGC ACTTCCATCA TCGGCGTCTC GCTCGACAAC
ATCGGGCGGC TCAATACCTT CTCGGCCGAC CCAGAGTATT GCGCCGGCAA GGTCGCCGTG
GCCTCGGATG CCGGGGGTAA AGTTTCAAAG GCTTTTGACC TGAGCGTGAG CGACACGCCT
GCGGGCCGCA AGGACACGCG CGGCGCCGAC ATCGATCATG CCCGAGTGGA GCGCACCACC
TTCATCGTGA CGCCCGACGG CAAGATTGCC GCGACCGTGG GCGGTCTGAC GCCTGTTGCC
AATGTCGAGA AGGCGCTGGA AGTGGTCCAG GGGCTGGCGA AGGCCGGGAC GGCTGGCTCC
AGGCTCTGA
|
|---|
| Protein sequence | MKHRIFKAAL PALMSTLLAL PAAAALKEGD AAPDFKLKAS LAGKEFNYSL KDALKKGPVV
VYFYPSAYTG GCNIQARSFA VNTEKFAAAG TSIIGVSLDN IGRLNTFSAD PEYCAGKVAV
ASDAGGKVSK AFDLSVSDTP AGRKDTRGAD IDHARVERTT FIVTPDGKIA ATVGGLTPVA
NVEKALEVVQ GLAKAGTAGS RL
|
|---|
| |