Gene Pnap_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0561 
Symbol 
ID4686091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp591711 
End bp592562 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID639833556 
Productamidohydrolase 2 
Protein accessionYP_980802 
Protein GI121603473 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA TCGACCTGCG CTGCCGTCCG GCCTACCTGC ACGATTTTTT CGGCGCCAAC 
CCCGGTTCGC CCGGCTACGA GACGGCGCGC TGGCTGAACC GCCGCGTCGG CACACGCGGC
AGCGACGAGC ATTTCGCGCG CTCGCTCACA CCCGAGGGCT TTCTGGCCGA GGTGCGCGAT
GCCGGCCTGA GCAAGGCCGT CGTCGTCGGC CGGAACACGC CCGCCCAGCA CCTGCCCAAC
GACCTGATCC ACCAGATCAC CCATGCGCAC GAGGAATTGC TGGGCATTGC CGGCATCGAC
CCGGCGCTGC AGGGTGTGGA CGGTGCGCTG GCCGAGATCG ACCGGGCCAT CGACCAGCTC
GGACTGGCTG GCATCGGCCT GGAGCCGGGC TTTGGCGCGC CCGCCCGGCA TCCGGACGAT
GCGCTGTATT TTCCGGTCTA TGAACACCTG AACCGCCGTG GCCTGCCGCT GTTCCTGATG
TCCGGCCCGA CGACGCCGGA CCCGGCCTTC AACGACCCCG GTCGGCTGGC GAAAGTGGCC
CAGGCTTTTC CGCAGCTGCG CATCGTCTGC TACCACGGCT ACTACCCGAA CACCCAGCAG
CTGGTGGGCG TGGCTTTCCG CTACGAGAAC ATCTCGGTGG TGCCCGACAT GTACCAGTTC
CTGCCCGGCA GCGAGGTCTT CGTGCAGGCG GCCAACGGCT TCATGGGCGA CCAGCTTTTG
TTCGGCTCGT CCTATCCGTT TCGCCCGATC CGCCAGTCGA TTGACGATTT TCTGGCGCTC
GGCTTCAGGG GCAAGGTGCT GGACAAACTG CTCTACGGCA ATGCGGCACG CCTGTTCGGG
CTGGCTGCCT GA
 
Protein sequence
MKVIDLRCRP AYLHDFFGAN PGSPGYETAR WLNRRVGTRG SDEHFARSLT PEGFLAEVRD 
AGLSKAVVVG RNTPAQHLPN DLIHQITHAH EELLGIAGID PALQGVDGAL AEIDRAIDQL
GLAGIGLEPG FGAPARHPDD ALYFPVYEHL NRRGLPLFLM SGPTTPDPAF NDPGRLAKVA
QAFPQLRIVC YHGYYPNTQQ LVGVAFRYEN ISVVPDMYQF LPGSEVFVQA ANGFMGDQLL
FGSSYPFRPI RQSIDDFLAL GFRGKVLDKL LYGNAARLFG LAA