Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0546 |
Symbol | |
ID | 4689040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 575351 |
End bp | 576088 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833541 |
Product | ABC transporter related |
Protein accession | YP_980787 |
Protein GI | 121603458 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG CACTACTGGA CATCGAGGTG CGCCGCAAGA CCTTTGGCGA TGCTACCGTG CTGCAGGGCA TTCGTCTGCA AATCAGCGCG GGCGAAATTG TCAGCCTGGT TGGCGCCAGC GGCTGCGGCA AGAGCACGCT GCTACGCATC GTGGCCGGAC TCGAAACGGC TTATCAGGGG CGCATCACGC TGGGTGGCCA GCCGCTGGCC GGACTGAGCC GCGATGTCGG TTTTATTTTT CAGGAGCCGC GCCTGTTTCC CTGGCTGAGC GTGGCGCAAA ACGTCGCCTT CAGCGCCGGA GCGCAAGGCG CACGCGATCC GCGCGTGGCG CAGTTGCTCG CCGAAGTGGG ACTGGCCGGC CTAACCGATG CGCTGCCCAA GCAGCTCTCG GGCGGCCAGG CGCAGCGCGT GGCCATTGCG CGCGGCCTGT TTGGCCAGCC GCGCCTGCTG CTGCTGGACG AGCCGTTTTC AGCCGTCGAT GCCTTTACCC GCATGCATCT GCAGGACATG CTGCTCGACA TTGCGCGGCG CCACGGCACC ACGCTGCTGC TGGTGACGCA TGACATTGAC GAGGCGGTCT ATCTGGCCGA CCGGGTCTGG GTGCTCGACA GCAAGCCCGG CCGCCTGTCG GCCGACATGG CCATTGACCT GCCCCAACCC CGCCAGCGCG ATACCGAGGC GCTGGCGCAG CGGCGCATTG GCGTGCTGCA CGCGCTCCAG GCAGTTCACG CCATTTGA
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Protein sequence | MSTALLDIEV RRKTFGDATV LQGIRLQISA GEIVSLVGAS GCGKSTLLRI VAGLETAYQG RITLGGQPLA GLSRDVGFIF QEPRLFPWLS VAQNVAFSAG AQGARDPRVA QLLAEVGLAG LTDALPKQLS GGQAQRVAIA RGLFGQPRLL LLDEPFSAVD AFTRMHLQDM LLDIARRHGT TLLLVTHDID EAVYLADRVW VLDSKPGRLS ADMAIDLPQP RQRDTEALAQ RRIGVLHALQ AVHAI
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