Gene Pnap_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0546 
Symbol 
ID4689040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp575351 
End bp576088 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID639833541 
ProductABC transporter related 
Protein accessionYP_980787 
Protein GI121603458 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG CACTACTGGA CATCGAGGTG CGCCGCAAGA CCTTTGGCGA TGCTACCGTG 
CTGCAGGGCA TTCGTCTGCA AATCAGCGCG GGCGAAATTG TCAGCCTGGT TGGCGCCAGC
GGCTGCGGCA AGAGCACGCT GCTACGCATC GTGGCCGGAC TCGAAACGGC TTATCAGGGG
CGCATCACGC TGGGTGGCCA GCCGCTGGCC GGACTGAGCC GCGATGTCGG TTTTATTTTT
CAGGAGCCGC GCCTGTTTCC CTGGCTGAGC GTGGCGCAAA ACGTCGCCTT CAGCGCCGGA
GCGCAAGGCG CACGCGATCC GCGCGTGGCG CAGTTGCTCG CCGAAGTGGG ACTGGCCGGC
CTAACCGATG CGCTGCCCAA GCAGCTCTCG GGCGGCCAGG CGCAGCGCGT GGCCATTGCG
CGCGGCCTGT TTGGCCAGCC GCGCCTGCTG CTGCTGGACG AGCCGTTTTC AGCCGTCGAT
GCCTTTACCC GCATGCATCT GCAGGACATG CTGCTCGACA TTGCGCGGCG CCACGGCACC
ACGCTGCTGC TGGTGACGCA TGACATTGAC GAGGCGGTCT ATCTGGCCGA CCGGGTCTGG
GTGCTCGACA GCAAGCCCGG CCGCCTGTCG GCCGACATGG CCATTGACCT GCCCCAACCC
CGCCAGCGCG ATACCGAGGC GCTGGCGCAG CGGCGCATTG GCGTGCTGCA CGCGCTCCAG
GCAGTTCACG CCATTTGA
 
Protein sequence
MSTALLDIEV RRKTFGDATV LQGIRLQISA GEIVSLVGAS GCGKSTLLRI VAGLETAYQG 
RITLGGQPLA GLSRDVGFIF QEPRLFPWLS VAQNVAFSAG AQGARDPRVA QLLAEVGLAG
LTDALPKQLS GGQAQRVAIA RGLFGQPRLL LLDEPFSAVD AFTRMHLQDM LLDIARRHGT
TLLLVTHDID EAVYLADRVW VLDSKPGRLS ADMAIDLPQP RQRDTEALAQ RRIGVLHALQ
AVHAI