| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0545 |
|---|
| Symbol | |
|---|
| ID | 4686158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 574425 |
|---|
| End bp | 575354 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639833540 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_980786 |
|---|
| Protein GI | 121603457 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.795546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.61218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCA TTTTTTCAAA GACCGCCATG TCTGCCAAGC CATTGACCAT TGCCCCCCAT
GATGTGCGGG AGACGCCTGC ATCGGTATTC CCGGGCCGTC GGGCTTATCC GGCCCGCCCA
GTCGCTGAAG CCGATCAGGC CGATGCGTTG CGTGAAATTC GCCCCGCGCG GCACTGGCCG
GGTATCGGCC TGGTCATCCC CTTGCTGGCG CTCGTGCTGG GCGAGGCTGC GCCGCGCCTG
GGCTGGATCA GCCCGCACCT GTTGCCGCCG CCCAGCACCG TGCTGCAGAC CCTGCGCGAC
TGGGGGCCGC TGACACTGGC CACGCATATC GGCGCCAGCG CGGCGCGGGT AGCCGCCGGG
TTTGCGCTGG GCGCCGCGCT GGCGGTCGCC ATCGGGGCGC TGGTGGGCCT GTCCCGGCTG
GGCGAGCGCC TGTTGGCGCC GAGCTTTCAG GCCCTGCGCG CCATTCCCTC TCTGGCTTGG
GTGCCTTTGC TGCTGCTCTG GCTGGGTATT GACGAGGCGC CGAAGATCGT TCTGATCGCC
ATCGGCGCTT TTTTCCCGGT CTACATGGGC GTGGCCTCGG GCTTTCGCGA TGTGGACCGC
AAGTTGGTGG AAGTCGCCCG CATGGCGCGG CTCTCGCCGC TGGCGCTGGT GCGCCGGGTG
CTACTGCCTG CGGCGCTGCC CGCCGTGCTG ACCGGCCTGC GTAATGGCCT GAGCCTGGCT
TGGATGTTCA TGGTGGCCGC CGAGCTGATT GCCGCCAGCC GTGGGCTGGG CTATTTGCTT
ACCGACGGCC GCGAGACCAG CCGCGCCGAC ATCGTGCTGG CTGCGATCTT GCTGCTGGCG
CTGCTGGGCA AGCTGACCGA CAGCGCCATG CAGTGGCTCG AACACCGGCT ACTGTCCTGG
CGCGACACCT TTGACGGCGG CCAGTCATGA
|
|---|
| Protein sequence | MPTIFSKTAM SAKPLTIAPH DVRETPASVF PGRRAYPARP VAEADQADAL REIRPARHWP
GIGLVIPLLA LVLGEAAPRL GWISPHLLPP PSTVLQTLRD WGPLTLATHI GASAARVAAG
FALGAALAVA IGALVGLSRL GERLLAPSFQ ALRAIPSLAW VPLLLLWLGI DEAPKIVLIA
IGAFFPVYMG VASGFRDVDR KLVEVARMAR LSPLALVRRV LLPAALPAVL TGLRNGLSLA
WMFMVAAELI AASRGLGYLL TDGRETSRAD IVLAAILLLA LLGKLTDSAM QWLEHRLLSW
RDTFDGGQS
|
|---|
| |