Gene Pnap_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0542 
Symbol 
ID4686154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp570177 
End bp571058 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID639833537 
Producthypothetical protein 
Protein accessionYP_980783 
Protein GI121603454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.628077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.28971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGCCA ATGCCACCAA GACCACGGCG CAGCTCGAAA CCATCTCGCC ACGCTGGCTC 
ACCCACCTGC TGCAATGGGT GCCAGTCGAG GCCGGTATCT ATCGCCTCAA CAAGGTCAAG
AATCCCGAGT CGATCAAGGT CAAATGCACG GCGCGTGAGC AAGAAGGCCA GTTGCCGCGC
ACCTTTGTGG ACTACGAGGA AAATCCGCGC GAATTTTTCC TCAACGCCGT CAGCACCGTG
CTCGACGTGC ATACGCGCAT CTCCGACCTC TACAGCAGCC CGCACGACCA GATCAAGGAG
CAGCTTCGCC TGACGATTGA AACCATCAAG GAAAACCAGG AAAGCGAGCT GATCAACAAC
CCCGACTACG GCCTGCTTTC CCAGGTGTCC GAAGAACAGC GAATTTTTCC ATTGACAGGC
GCCCCGACGC CAGACGACCT GGATGAACTG CTGACCAAAG TGTGGAAGGA GCCGGCATTT
TTCCTGACCC ACCCGCTGGC CATTGCCGCC TTCGGGCGCG AAGCGACCCG GCGCGGAACG
CCGCCGCCAA CGGTCAGCCT GTTCGGCTCT CAGTTCATCA CCTGGCGCGG CATTCCCTTG
ATTCCTTCCG ATAAGGTGCC GGTGGCCGAC GGCAAGAGCA AAATCCTGCT GCTGCGCGTG
GGCGACAAGC GCCAGGGCGT GGTCGGCCTG TTCCAGCCGG GTCTGACGGG CGAGCAGGGG
CCGGGCCTGT CGGTGCGCTT CATGGGCATC AACAACCACG CCATCGCGTC CTACCTGATC
TCGCTGTACT GCTCGCTGGC CGTGCTGACC ACCGACGCGC TGGCCGTGCT CGACGATGTC
GAGATCGGCA AGTACCACGA TTACGCCGAC ACCTACAAAT AA
 
Protein sequence
MLANATKTTA QLETISPRWL THLLQWVPVE AGIYRLNKVK NPESIKVKCT AREQEGQLPR 
TFVDYEENPR EFFLNAVSTV LDVHTRISDL YSSPHDQIKE QLRLTIETIK ENQESELINN
PDYGLLSQVS EEQRIFPLTG APTPDDLDEL LTKVWKEPAF FLTHPLAIAA FGREATRRGT
PPPTVSLFGS QFITWRGIPL IPSDKVPVAD GKSKILLLRV GDKRQGVVGL FQPGLTGEQG
PGLSVRFMGI NNHAIASYLI SLYCSLAVLT TDALAVLDDV EIGKYHDYAD TYK