Gene Pnap_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0539 
Symbol 
ID4688477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp567423 
End bp568349 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID639833534 
ProductSerine O-acetyltransferase 
Protein accessionYP_980780 
Protein GI121603451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.183279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGTTT TTGACATTGA GCATATTGTG GGCGCGCTGC ATGCGGTGCG CCAGGACTGG 
CGCGAATCGC AAAAGCGCTC GCGTGAGCCC GGCGGGCGCG AACTTCCATC GCGTGATGCA
CTGGCGCAGG TGGTCGAAGC GCTCAAGGGT GCGCTGTTTC CCATGCGGCT GGGGCCGCTG
GACCTGCGCC AGGAAAGCGA GGACATTTAT GTCGCCCATA CGCTGGACTC GGCGCTGCAC
CAGCTTTTGG CGCAAATCCG GCTGGAGCTG ACTTACAGCG CACGCCATCA AATGCGCAAT
GGCTCCGACC TGGAGGCCGA GGCATTGACC ACCACGCGCA GTTTCGGCGC CGCGTTGCCC
GAGATTCGCA AGCTGCTCGA CAGCGACGTT CTGGCGGCCT ATCACGGCGA CCCGGCGGCG
CGCAGCGTGG ATGAAGTGCT GCTGTGCTAC CCCGGTATCC TGGCCATGAT TCACCACCGG
CTGGCGCACC AGCTCTACCG GCTGGGCCTG CCCTTGCTGG CGCGCATCGT GGCCGAACTG
GCGCACGCCG TGACCGGCAT CGACATTCAT CCGGGCGCGC AAATCGGCGC GAGTTTTTTC
ATCGACCACG GCACGGGCGT CGTGATTGGA GAAACCGCCG TGATCGGCCA GCGCGTGCGG
CTGTACCAGG CCGTCACGCT GGGCGCCAAG CGCTTTCCCA CCGATGAGGA GGGCAACCTG
CAAAAAGGCC TGCCGCGTCA CCCGGTAGTC GAGGACGACG TGGTGATTTA CGCCGGCGCC
ACCGTGCTGG GCCGGGTGAC GCTGGGCCGA GGCGCGACCA TCGGCGGCAA TGTCTGGCTG
ACCCATGACG TGCCGCCCGG AGGCAACGTG ACACAGGCTG TTTCCCGCGA AGCAGGACAA
GGCAGCGCTG CCAGGCAGCG GCCGTGA
 
Protein sequence
MAVFDIEHIV GALHAVRQDW RESQKRSREP GGRELPSRDA LAQVVEALKG ALFPMRLGPL 
DLRQESEDIY VAHTLDSALH QLLAQIRLEL TYSARHQMRN GSDLEAEALT TTRSFGAALP
EIRKLLDSDV LAAYHGDPAA RSVDEVLLCY PGILAMIHHR LAHQLYRLGL PLLARIVAEL
AHAVTGIDIH PGAQIGASFF IDHGTGVVIG ETAVIGQRVR LYQAVTLGAK RFPTDEEGNL
QKGLPRHPVV EDDVVIYAGA TVLGRVTLGR GATIGGNVWL THDVPPGGNV TQAVSREAGQ
GSAARQRP