| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0538 |
|---|
| Symbol | |
|---|
| ID | 4687739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 566895 |
|---|
| End bp | 567371 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639833533 |
|---|
| Product | rhodanese domain-containing protein |
|---|
| Protein accession | YP_980779 |
|---|
| Protein GI | 121603450 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.15886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGG CCTCTGAAAC AACTGAACTG GTTTTGCCTT TAGCGCTTGA TGTTGCACGG
GAAGACGCGC GGGAAGCCGG CTTGTCTTAT GCGGGCGGGG TGCCTCCGGC CGTGGCGTGG
CAACTGTTTT CTACCGGCCA TGCGCTGTTG GTGGATGTTC GCTCGGGCGA AGAGCGCAAG
TTTGTCGGCC ATGTGCCGCA AAGCCTGCAT GTGCCCTGGG CCAGCGGCAC CAGCCTGACG
CGCAATCCGC GCTTCGTGCG CGAACTTGAA GCGAAAACCG GCGGCAAGGA TGCGGTGCTG
CTTTTGCTGT GCCGCAGCGG CAAGCGTTCT GCGTTGGCCG CAGAGGCCGC AGCCAAGGCC
GGTTTCACGC AGGTTTACAA CGTGCTCGAA GGCTTTGAAG GCGAAATTGA CGAACAGCAA
CATCGCGGCG CGGCCGACGG CTGGCGTTTT CACGGTCTGC CTTGGGTGCA AGACTGA
|
|---|
| Protein sequence | MAMASETTEL VLPLALDVAR EDAREAGLSY AGGVPPAVAW QLFSTGHALL VDVRSGEERK
FVGHVPQSLH VPWASGTSLT RNPRFVRELE AKTGGKDAVL LLLCRSGKRS ALAAEAAAKA
GFTQVYNVLE GFEGEIDEQQ HRGAADGWRF HGLPWVQD
|
|---|
| |