| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0523 |
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| Symbol | |
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| ID | 4689096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 549995 |
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| End bp | 551251 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639833519 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_980765 |
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| Protein GI | 121603436 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAT TTTCCAAACT GGCCGCTGCT GCGGCTTTTG TGGCGGTGGC TGCGGCGGCT
ATGGCGGGCG AAGTCGAAGT GCTGCATTAC TGGACCTCCG GCGGCGAGGC CAAGTCGGTT
GACGAACTCA AGACCATGAT GGCGGGCCGT GGCTATACCT GGAAAGACTT CGCCGTGACA
GGCGGTGGTG GCGAAAACGC CATGGGCATG CTGAAAAAGC GCGTGCTGGC GGGCAATCCA
CCGGCGGCGG CCTTGATCAA AGGCCCCACT ATTCAGGAAT GGGCCAATCT CAATGTGCTG
ACCAACCTCG ACACCATGGC GCAGTTTGGC AAGTGGGACG AGTCGCTGCC CAAAGTGATT
GCCGAGCAGA TGAAGTACCA GGGCCACTAT GTGGCAGTCC CCGTCAATGT TCACCGCGTG
AACTGGCTGT GGGCCAATTC GGCCGTGCTG AAAAAGGCCG GGGTCACTGC CTTGCCAAAA
ACATACGAGG AGTTTTTTGC CGCCGCCGAC AAGCTGCGGG CCGCAGGGTT TATTCCCCTG
GCGCACGGCG GGCAGGACTG GCAGGACTTC ACGGTGTTCG AGTCGGTGGC TCTGGGCGTG
GGCGGTACGG CGTTTTACAA CAAGGCGCTG GTCAGGCTCG ATGAGGCCGC CCTTGCTGGC
AGCGAGATGC GTAAAACCCT GGAGGTGTTT CGCCGGCTCA AGCCCTATAC CGATGACAAG
TCCGCCGGAC GCGACTGGAA CCAGGCCACC GCCCTGGTGA CTGCCGGAAA AGCCGGTTTT
CAGCTAATGG GGGACTGGGC CAAGGGCGAA TTTCTGGCGG CCAATCAAGA GCCGGGCAAG
GACTTTACCT GTACGCCAGC GCCCGGCACT GCCCATGCCT ACAGCTTCAA TGTCGATTCA
TTTGCCATGT TCCAGCTCAA AAACGGGGAT GCGCGCAAGG CGCAGGGCTA TTTGGCTTTT
TTGCTGATGG GGCAGAACTT TCAGGAGAGG TTCAACCTGC GCAAGGGCTC GATTCCGGCC
AGGCTGAACA TGAATCTGGA CAAGTTTGAC GAATGCGCCA GGTTGTCCGG CCAGGATTTT
GCGGCGATGT CCAAAACCGG CGCGCTGGTG CCTTCCGTGG CGCATGGCAT GGCCGTGCCG
CCTGCGGTGC AGTCGGCTCT GCGCGCCGCT GTGAGTGATT TCTGGAATAA CGATAAAACC
ACCGTGAACG AGACCCTGGC CAGGTTGGCG CTGGCGGCCG GCGCCCCAGT GAAGTAA
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| Protein sequence | MLKFSKLAAA AAFVAVAAAA MAGEVEVLHY WTSGGEAKSV DELKTMMAGR GYTWKDFAVT
GGGGENAMGM LKKRVLAGNP PAAALIKGPT IQEWANLNVL TNLDTMAQFG KWDESLPKVI
AEQMKYQGHY VAVPVNVHRV NWLWANSAVL KKAGVTALPK TYEEFFAAAD KLRAAGFIPL
AHGGQDWQDF TVFESVALGV GGTAFYNKAL VRLDEAALAG SEMRKTLEVF RRLKPYTDDK
SAGRDWNQAT ALVTAGKAGF QLMGDWAKGE FLAANQEPGK DFTCTPAPGT AHAYSFNVDS
FAMFQLKNGD ARKAQGYLAF LLMGQNFQER FNLRKGSIPA RLNMNLDKFD ECARLSGQDF
AAMSKTGALV PSVAHGMAVP PAVQSALRAA VSDFWNNDKT TVNETLARLA LAAGAPVK
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