| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0521 |
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| Symbol | |
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| ID | 4688021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 548332 |
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| End bp | 549600 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833517 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_980763 |
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| Protein GI | 121603434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC TGCGTGTATG GGCCAATGCG CGGCCCATGG GCTGGTTTGG CCATGCGGCG
GGTGAGTTCT TTTTTGAATA CGACGCGCAG TGGCTGGCGC AGCCGGGGGC CTATGCGCTG
GCGCCACAGT TTGTCCTGAA CGCCCAGACC ACGCGAGGCG CGCTGGTGCG CAGCTTTTTC
GAAAACCTGT TGCCCGAAGG CGAGGTGCTG GACGATGTGC TGGCCGCCTT GCAGTTGCGT
GGCGCGTCTT CGCTGGACGT GCTGGGCCGC CTGGGAGCGG AACTGCCTGG TGTGCTGTCG
CTGCTGCCCG AAGATTCCAT GCCGCGTATC CAGCAGGACT ACCGTGATTT GCCGTTTGCC
GAACTCAGCG CCCGGCTGGC ACACCGCACC GCCACACCGC TGCTGGTGTC CAACACGCAG
GCCGGCATGT CGCTGGCCGG TGCGCAGGAC AAGCTGGGCC TGCGCTTCGA GCCCAGGACC
AGACGGCTGT ACGACAGCGT GGGCGCATCA CCCACCACGC ACATCCTGAA GCCCGACACG
CGCCAACTGC GCTACCAGCC CAGCGCCATC AATGAATACG CCTGCATGAA GCTGGCCCAG
GCGCTGAAGC TGCCGGTGCC CAAGGTGTGG CTGCTGCGCG TGCCCGAGGC GGCCTATGTG
GTGGAGCGCT ATGACCGGGT GCTGACGGCG GGCAACATTG TCGGCCTGCA CCAGTTTGAC
GGCTGCCAGC TGCTGGGCCA TGGTCCGGGC TGGAAGTATG AGCGCTCGGG CGGGCTGGCG
AGCCTTCCCA AACTGGTAGC CGCCTTGCGT GCGCTGCGGG TGCGCGGCAG CGATTTGCTG
CAGTTCCAGC GCTGGGTGAT GTTCAATTAC CTGATTGGCA ATGCCGATGC GCATGCCAAG
AACCTGTCGC TGCTGGTTGA TGGCAAAGGC TACCGGTTGG CGCCGTTTTA CGACCTGCTG
TGCGTGCGGG CTTACGGCGA CGAAGGCCTG GCGCTTTTCA TCGGCGATGA CGAGACGTTT
GACGCCGTGG GCGCGCATTC ATGGGAGGCG TTTTGCACGG ATTGCGGGTT TGGCCTGGCG
CCCACGCTGG TGGAATTCAG GCGCATGGCG CTGGCGCTGC TGCCCGCATG GGGAAAAGTT
CAGACCAGCG TGGCGAAGGA AAAGGGCGTG ACCGAGGCCG AACGCGCCAT GCTGGCGCGC
ATGTCCACCA TTTTCGAGCG CCATGCCGGC CATGCGTTGT CCATGACAGC GCTGCCTGCT
CCCGTCTAA
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| Protein sequence | MIRLRVWANA RPMGWFGHAA GEFFFEYDAQ WLAQPGAYAL APQFVLNAQT TRGALVRSFF
ENLLPEGEVL DDVLAALQLR GASSLDVLGR LGAELPGVLS LLPEDSMPRI QQDYRDLPFA
ELSARLAHRT ATPLLVSNTQ AGMSLAGAQD KLGLRFEPRT RRLYDSVGAS PTTHILKPDT
RQLRYQPSAI NEYACMKLAQ ALKLPVPKVW LLRVPEAAYV VERYDRVLTA GNIVGLHQFD
GCQLLGHGPG WKYERSGGLA SLPKLVAALR ALRVRGSDLL QFQRWVMFNY LIGNADAHAK
NLSLLVDGKG YRLAPFYDLL CVRAYGDEGL ALFIGDDETF DAVGAHSWEA FCTDCGFGLA
PTLVEFRRMA LALLPAWGKV QTSVAKEKGV TEAERAMLAR MSTIFERHAG HALSMTALPA
PV
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