Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0514 |
Symbol | |
ID | 4688957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 543224 |
End bp | 543898 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639833510 |
Product | phosphoglycerate mutase |
Protein accession | YP_980756 |
Protein GI | 121603427 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.575889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAAC CGACCCGCAT CATCGCCATT CGCCATGGCG AAACCACCTG GAACGTGGAC ACCCGCATCC AGGGCCACCT GGACATTCCA CTGAACGACA CCGGCCGCCT GCAGGCCGCG CGCCTGGCGC TGGCGCTGAA GGAAGAACCC ATCACGGCGG TGTACGCCAG CGACCTGGCC CGCGCCTGGG AAACCGCCGA ATACCTCGGG CGCGCGCGCG GCCTGCCGGT CACCCCTGAA ACCGGCCTGC GCGAACGCTG CTTTGGCGAT TTTGAAGGCA AGACCTTTGC CGAAATCGAA GCCCTGCTGC CCGAACAGTC GCAGCGCTGG CGCAAGCGCG ACCCGGAATT CGCACCCGCC GGCGGCGAGT CCCTGCTGGC GCTGAGCCAG CGCGTCGTCG AGGCCGCCGA GCGAATAGCC GCCCGGCACC CGGGCGAGCT GATCGCGCTG GTCGGCCACG GCGGCGTGAT GGACGTGCTC TACCGCGCCG CCGCCCGCCT GCACATCCAG GCGCCGCGCA CCTGGATGCT GGGTAACGCG GCCATCAACC GGCTGCTCTG GACGCAGCAG GGCTTTACCC TGGTCGGCTG GGCCGACACC CAGCACCTGA ACGACGAATC CCTGGACGAC GGCCTGCTGG CCGCCGGACC GAGCCCCATT GTTTCCACCA CCTGA
|
Protein sequence | MIEPTRIIAI RHGETTWNVD TRIQGHLDIP LNDTGRLQAA RLALALKEEP ITAVYASDLA RAWETAEYLG RARGLPVTPE TGLRERCFGD FEGKTFAEIE ALLPEQSQRW RKRDPEFAPA GGESLLALSQ RVVEAAERIA ARHPGELIAL VGHGGVMDVL YRAAARLHIQ APRTWMLGNA AINRLLWTQQ GFTLVGWADT QHLNDESLDD GLLAAGPSPI VSTT
|
| |