Gene Pnap_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0513 
Symbol 
ID4688509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp542006 
End bp543196 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content67% 
IMG OID639833509 
Productputative threonine aldolase 
Protein accessionYP_980755 
Protein GI121603426 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.85314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC TGCCCGCGCG CCTCTCCGAA CTGATCGGCA AACCTGTCCA CGACATCGAC 
ACCCCAGCCC TGGTGATTGA CATGGACGCC CTGAAACGCA ACCTGGTCCG AATGGCTGAC
TTCGCCAAAA AACACCATGT CCGCTGGCGC CCCCACGCCA AGCTGCACAA AAGCACCGTG
CTGGCCAAAA TGCAGATCAA GGCCGGCGCC GCCGGCGTGT GCGTGCAAAA AACCGCCGAG
GCCGAGGTCA TGGTGGCCGG CGGCATCTAC AACGTGTACA TCAGCAACCA GGTGATTGCC
CCGGCCAAGC TGGCGCGGGT AGCCGCCCTC ACGCAGGCGG TGGCGTCCCA CCGCGGCGGC
CAGATCGCCA TCGCCGTGGA CAGCCCGGAG GGCGTGAGCC GGCTGGCAAA GGCCATGACC
GAGGCGCGCA CCAGCGCGCG CAGCAGCGTG GCGACGGTGA TTGACGTGTT CGTCGAGATC
GATGTCGGCC AGGGGCGCTG CGGCGCCCAG CCCGGCGAGG CCGCCGTCAA GCTGGCGCTG
GAAATCCGCA AGCACCCGGC GCTGCGCTTT GCCGGGCTGC AGGCCTACCA AGGCAAGGCC
CAGCATTTGC GCAGCGCCAT CGAGCGCCGC ATGGCCGCCG CCAGCGCCAC CAAGGCCGTG
GAGCTGACCT GCCAGCTGCT CAAGGCGCAC GGCATCGCGC CCGGGCTGGT GACCGGCGCG
GGCACCGGCA GCTTCGCGCT GGAGGCCGCC AGCGGCGTAT ATGGCGAGTT GCAGGCCGGC
TCCTTCATGT TCATGGACGT GGACTATGCC CAGAACGAGC GCGACCCGGC ACAGCCGCAG
TTCGAGCACG CGCTGTTTGT CAAGACGCAG GTCATCAGCA CCCACGCCAG CCACGCCGTG
TGCGACGCCG GCCACAAGAG CCACGCCATC GACTCAGGCA TGCCGAAGGT GCATGCCTTT
GAGAAAAAAA GCGGGCTGGA CTACTTCAAC GGCGGCGACG AGCACGGCAT CTTGCGGCCC
GTGGATGGCA GCGACCGCCT GCCGGCGCTG GGCCAGCTGC TGTGGCTGAT TCCCGGCCAC
TGCGATCCGA CAGTGAACCT GCACGATGTG ATGATCGGCG TCAGCGGCGG CCTGCGAAAC
GGCACGGTGG ACCGCATCAT CCAGGTCGAT GCGCGCGGCG CGATGACTTG A
 
Protein sequence
MSNLPARLSE LIGKPVHDID TPALVIDMDA LKRNLVRMAD FAKKHHVRWR PHAKLHKSTV 
LAKMQIKAGA AGVCVQKTAE AEVMVAGGIY NVYISNQVIA PAKLARVAAL TQAVASHRGG
QIAIAVDSPE GVSRLAKAMT EARTSARSSV ATVIDVFVEI DVGQGRCGAQ PGEAAVKLAL
EIRKHPALRF AGLQAYQGKA QHLRSAIERR MAAASATKAV ELTCQLLKAH GIAPGLVTGA
GTGSFALEAA SGVYGELQAG SFMFMDVDYA QNERDPAQPQ FEHALFVKTQ VISTHASHAV
CDAGHKSHAI DSGMPKVHAF EKKSGLDYFN GGDEHGILRP VDGSDRLPAL GQLLWLIPGH
CDPTVNLHDV MIGVSGGLRN GTVDRIIQVD ARGAMT