Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0513 |
Symbol | |
ID | 4688509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 542006 |
End bp | 543196 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833509 |
Product | putative threonine aldolase |
Protein accession | YP_980755 |
Protein GI | 121603426 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.85314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACC TGCCCGCGCG CCTCTCCGAA CTGATCGGCA AACCTGTCCA CGACATCGAC ACCCCAGCCC TGGTGATTGA CATGGACGCC CTGAAACGCA ACCTGGTCCG AATGGCTGAC TTCGCCAAAA AACACCATGT CCGCTGGCGC CCCCACGCCA AGCTGCACAA AAGCACCGTG CTGGCCAAAA TGCAGATCAA GGCCGGCGCC GCCGGCGTGT GCGTGCAAAA AACCGCCGAG GCCGAGGTCA TGGTGGCCGG CGGCATCTAC AACGTGTACA TCAGCAACCA GGTGATTGCC CCGGCCAAGC TGGCGCGGGT AGCCGCCCTC ACGCAGGCGG TGGCGTCCCA CCGCGGCGGC CAGATCGCCA TCGCCGTGGA CAGCCCGGAG GGCGTGAGCC GGCTGGCAAA GGCCATGACC GAGGCGCGCA CCAGCGCGCG CAGCAGCGTG GCGACGGTGA TTGACGTGTT CGTCGAGATC GATGTCGGCC AGGGGCGCTG CGGCGCCCAG CCCGGCGAGG CCGCCGTCAA GCTGGCGCTG GAAATCCGCA AGCACCCGGC GCTGCGCTTT GCCGGGCTGC AGGCCTACCA AGGCAAGGCC CAGCATTTGC GCAGCGCCAT CGAGCGCCGC ATGGCCGCCG CCAGCGCCAC CAAGGCCGTG GAGCTGACCT GCCAGCTGCT CAAGGCGCAC GGCATCGCGC CCGGGCTGGT GACCGGCGCG GGCACCGGCA GCTTCGCGCT GGAGGCCGCC AGCGGCGTAT ATGGCGAGTT GCAGGCCGGC TCCTTCATGT TCATGGACGT GGACTATGCC CAGAACGAGC GCGACCCGGC ACAGCCGCAG TTCGAGCACG CGCTGTTTGT CAAGACGCAG GTCATCAGCA CCCACGCCAG CCACGCCGTG TGCGACGCCG GCCACAAGAG CCACGCCATC GACTCAGGCA TGCCGAAGGT GCATGCCTTT GAGAAAAAAA GCGGGCTGGA CTACTTCAAC GGCGGCGACG AGCACGGCAT CTTGCGGCCC GTGGATGGCA GCGACCGCCT GCCGGCGCTG GGCCAGCTGC TGTGGCTGAT TCCCGGCCAC TGCGATCCGA CAGTGAACCT GCACGATGTG ATGATCGGCG TCAGCGGCGG CCTGCGAAAC GGCACGGTGG ACCGCATCAT CCAGGTCGAT GCGCGCGGCG CGATGACTTG A
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Protein sequence | MSNLPARLSE LIGKPVHDID TPALVIDMDA LKRNLVRMAD FAKKHHVRWR PHAKLHKSTV LAKMQIKAGA AGVCVQKTAE AEVMVAGGIY NVYISNQVIA PAKLARVAAL TQAVASHRGG QIAIAVDSPE GVSRLAKAMT EARTSARSSV ATVIDVFVEI DVGQGRCGAQ PGEAAVKLAL EIRKHPALRF AGLQAYQGKA QHLRSAIERR MAAASATKAV ELTCQLLKAH GIAPGLVTGA GTGSFALEAA SGVYGELQAG SFMFMDVDYA QNERDPAQPQ FEHALFVKTQ VISTHASHAV CDAGHKSHAI DSGMPKVHAF EKKSGLDYFN GGDEHGILRP VDGSDRLPAL GQLLWLIPGH CDPTVNLHDV MIGVSGGLRN GTVDRIIQVD ARGAMT
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