| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0508 |
|---|
| Symbol | |
|---|
| ID | 4687006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 537696 |
|---|
| End bp | 538151 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639833504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980750 |
|---|
| Protein GI | 121603421 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTA ATTCACTGAG TTTGTCGCTG CAGTTCGGAA AATTCCCCGA TGCGGCCCTG
CACCGCGCCG CCCTGCCGCG CCACAGCGTG GCCCGCTGGA TTCGCCACGC GCTGCAAAGC
GATGCCGAGA TCACCGTTCG CATCGTGGGC GCCGAGGAAG GCCAGGCGCT GAACCGCGAT
TACCGGGCAA AGGACTACGC CACCAATGTG CTGACCTTTG ACTACACGCA GGCCCCTTAC
GTGACCGCCG ACCTGGTGCT GTGCGCGCCC GTGGTCGCAA AAGAGGCGCA GGACAACCAG
AAAACCCTGC AGGCACATTA CGCGCATCTG CTGGTGCATG GCACGCTGCA TGCGCAGGGC
TACGACCATG AAACCGGCGA AGAAGACGCC GAGGAGATGG AAGCGCTGGA AATCGAGATT
CTGGCGGGCC TGGGCTTCGA CAACCCCTAC CGCTGA
|
|---|
| Protein sequence | MALNSLSLSL QFGKFPDAAL HRAALPRHSV ARWIRHALQS DAEITVRIVG AEEGQALNRD
YRAKDYATNV LTFDYTQAPY VTADLVLCAP VVAKEAQDNQ KTLQAHYAHL LVHGTLHAQG
YDHETGEEDA EEMEALEIEI LAGLGFDNPY R
|
|---|
| |