Gene Pnap_0500 details

Gene Information

• Locus tag: Pnap_0500
• Symbol: rplM
• ID: 4689741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas naphthalenivorans CJ2
• Kingdom: Bacteria
• Replicon accession: NC_008781
• Strand: +
• Start bp: 529265
• End bp: 529708
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639833496
• Product: 50S ribosomal protein L13
• Protein accession: YP_980742
• Protein GI: 121603413
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAACCT TCAGCGCCAA ACCCGCTGAC GTGACGCACG AGTGGTTTGT GATTGACGCG 
ACCGACAAGG TCCTCGGACG AGTAGCCAGC GAAGTTGCTC TCCGTTTACG CGGCAAACAC 
AAGGCCATTT ACACGCCTCA CGTCGATACC GGCGACTTCA TCGTCATCAT CAACGCAGCC 
CAGTTGCGTG TGACCGGTGC CAAATCGACC GACAAGATTT ACTACCGTCA TTCCGGTTAT 
CCAGGCGGCA TCACTGCCAC CAATTTCCGC GACATGCAAA CCAAGTTTCC TGGCCGCGCC 
CTGGAAAAAG CCGTCAAGGG CATGCTGCCC AAGGGCCCGC TCGGTTACGC CATGATCAAG 
AAACTCAAGG TGTACGGTGG TGCAGAGCAT CCGCACACCG CCCAACAGCC TAAAGTGCTT 
GAAATTGCAG GAGCCGCCAA ATGA 

 

Protein sequence

MKTFSAKPAD VTHEWFVIDA TDKVLGRVAS EVALRLRGKH KAIYTPHVDT GDFIVIINAA 
QLRVTGAKST DKIYYRHSGY PGGITATNFR DMQTKFPGRA LEKAVKGMLP KGPLGYAMIK 
KLKVYGGAEH PHTAQQPKVL EIAGAAK