| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0495 |
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| Symbol | |
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| ID | 4688597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 522761 |
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| End bp | 523792 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833491 |
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| Product | cytochrome bd ubiquinol oxidase, subunit II |
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| Protein accession | YP_980737 |
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| Protein GI | 121603408 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACA TGGCACCCAA CCTCACCCAG GCCGCCGGCT GGATGCCGAT TGTTTTCCTG
GGCGTCATGG GGCTGGCGAT GCTGGCCTAT GTGATCCTGG ACGGCTACGA CCTCGGCGTC
GGAATGCTGA TGCGCCGCGC CAGCGAGGAC GACAAGGACA GCATGATTGC CAGCATCGGC
CCGTTCTGGG ATGCCAATGA AACCTGGCTG GTGCTGGGCG TCGGCATCTT GCTGACGGTG
TTCCCGATGG CGCACGGCGT GATTCTGGGC GCCCTGTACC TGCCGGTGGC CATGATGCTG
ATCGGCCTGA CGCTGCGTGG CGTGGCCTTT GACTTCCGGG TCAAGGCGCA CGCGGCCCGC
AAGCCGCTGT GGAACCGCGC CTTTTATGCC GGCTCGCTGA TGGCCAGCTG GAGCCAGGGC
TACATGCTGG GCTCGCTGAT CACCGGCTTT GCCACGACCG GCTGGGTCAT CGCCTTCAAT
GCGGTGATCG GCCTGGCGCT GCTGTCGGCC TACTGCCTGC TGGGCGCCGG CTGGCTGATC
ATCAAGTCGG GTGGCGCGCT GCAGCTGCAG GCAGTGCGCT GGGCGCGCGC CAGCCTGTGG
CTCACCATGG CGGGCATCGC GGCCATCTCG CTGGCCACAC CGTGGGTCAG CCCGGCGATT
TTCGACAAGT GGTTTTCGTT TCCCAACATC GTGCTGCTGC TGCCGATTCC GGTTGCCACC
GCCGTGCTGT TCTGGGTGAT TTACCGCAGC CTGCAGCGCC TGCCCACGCG CCTGGCGCAG
GGCAATGAAT ACGGCATCTG GGTGCCTTTT GGCGCCACCA TCGGGGTGTT TTTGCTGGCG
TTCTACGGCC TGGCCTACAG CCTGTTCCCG TGGCTGGTGA TTGACCGTAT CAACATCTGG
CAAGCGGCCA TTTCGCCGGA ATCCATGGGC GTCATCCTGG CGGGCGCGGT GGTGGTGCTG
CCGATGATCA TCGGCTACAC CGTGTTTTCC TACCGCGTGT TCTGGGGCAA GAGCGGCGCG
CTGAAGTACT AG
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| Protein sequence | MLDMAPNLTQ AAGWMPIVFL GVMGLAMLAY VILDGYDLGV GMLMRRASED DKDSMIASIG
PFWDANETWL VLGVGILLTV FPMAHGVILG ALYLPVAMML IGLTLRGVAF DFRVKAHAAR
KPLWNRAFYA GSLMASWSQG YMLGSLITGF ATTGWVIAFN AVIGLALLSA YCLLGAGWLI
IKSGGALQLQ AVRWARASLW LTMAGIAAIS LATPWVSPAI FDKWFSFPNI VLLLPIPVAT
AVLFWVIYRS LQRLPTRLAQ GNEYGIWVPF GATIGVFLLA FYGLAYSLFP WLVIDRINIW
QAAISPESMG VILAGAVVVL PMIIGYTVFS YRVFWGKSGA LKY
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