| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0487 |
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| Symbol | |
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| ID | 4687769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 508744 |
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| End bp | 509847 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639833483 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_980729 |
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| Protein GI | 121603400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTTT GGTGCGCTGC CTTGTTGACA GCATCACTGG GTCAGGTATG CCAGGCGCAA
ATCCTGATCG GACAAACAGC CGGATTTACC GGCCCCGTGG GCGCGGGCGT CAAGGAAACG
ACAGACGGGG CAAGGCTCTA CCTGGACAGC ATCAATGCCA AAGGCGGTAT TGGCGGACAG
AAGATTGAAT TGATCTCACT CGACGACAAG TTCGACCCCA AACTTGCGGC AGAAAATGCG
CGCAAGCTGA TTGAAGAGAA AAACGTGGTG GCGATGTTCC TGACACGGGG CACACCGCAC
ACCGAAGCGG TGATTCCCCT TCTTGACAAA TACGCGGTGC CGCTCGTGGG TCCGTCCACC
GGCGCCATGG TGCTGCACCA GCCGGTGCAA AAGCATGTTT TCAATGTGCG GGCACCCTAC
CAGCGCGAAG CGGAAAAAGC CATCACCCAC CTGAGTTCGA TGGGCATCAG CCGGATCGCC
ATTATTTATA CCGACGACAG TTTCGGCACC GACGGCCTGA CAGGTGCGCA AAAAGGCATG
GCCACGGCCA AGCGCACTCT GGTCGCACTG GAAAAAATCA ACCGCGCCAA GCCCGACTTC
ACCGCCCTGG CGCCCAAAAT CCAACAGTCC AATGCGCAGG CCGTCATCAT CATTGCGTCC
GGCCAGACGG TGGCTGAGGG TTTGCAGGCC TTGCGTGCAG CCGGCTCGGC CGCACAGATC
GTGACGCTGT CCAACAACGC CTCCAGCGGA TTCATCAAGA GCCTGGGCGA CAGCGGGCGC
GGCATGATTG TCACGCAGGT CTTTCCTTCA GAACGCTCCA TCGCGTACTC CCTGGTCAAG
GAAGCCCTGG AACTGGTCAA GGCCAAGCAG CAAACCGAAC TCAGCCCGGC CATGCTTGAG
GGTTTTGCTG CTGCCAAGAT CCTGGTTGAA GGTTTGCGCC GCGCCAGCCC CCAACCCAGC
CGCGAAAAAC TCCAGGCAGC GCTGGAAGGC ATCGGCAAAC TCGATATTGG CGGGCTGGAG
GTGACCTACA ACGCGAATGA CCACAGCGGA CTTGATTTTT CAGACCTGTC CATCATCGGC
ACTGATGGGA AATTCAAGCG CTGA
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| Protein sequence | MFFWCAALLT ASLGQVCQAQ ILIGQTAGFT GPVGAGVKET TDGARLYLDS INAKGGIGGQ
KIELISLDDK FDPKLAAENA RKLIEEKNVV AMFLTRGTPH TEAVIPLLDK YAVPLVGPST
GAMVLHQPVQ KHVFNVRAPY QREAEKAITH LSSMGISRIA IIYTDDSFGT DGLTGAQKGM
ATAKRTLVAL EKINRAKPDF TALAPKIQQS NAQAVIIIAS GQTVAEGLQA LRAAGSAAQI
VTLSNNASSG FIKSLGDSGR GMIVTQVFPS ERSIAYSLVK EALELVKAKQ QTELSPAMLE
GFAAAKILVE GLRRASPQPS REKLQAALEG IGKLDIGGLE VTYNANDHSG LDFSDLSIIG
TDGKFKR
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