Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0478 |
Symbol | |
ID | 4687584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 499301 |
End bp | 500053 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833475 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_980721 |
Protein GI | 121603392 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGTG CTGAACTGAA GGTGCTTCCA GAAGGCGTGC AGCGGGTTGC CGCGTTTTTG CAGGACAAGG GCCACATGCA TGCGCCCGTG ATGCTCGATG ACGCCGCGCG CACCGCGCAG CAGGCGGCCG ATGCGCTGGG CGTGGCCGTC GGCCAGATTG CCAAAAGCAT CATCTTTCGC CGCAAGTCGG ACGATGCTGC AGTGCTGGTC GTGACCTCGG GCGACCGGCG CGTCGATGAA AAGAAGGTCG AGGCGCTGGT CTGCCTGGAC GGCAAACGGC TGGGGCGCGC CGATGCGGCA TTCGTCAAAA GCCGCACCGG CTTTTCGATT GGCGGCGTCT CGCCGCTGGC CCACGCCACG CCGTCGGTCA CGCTGATCGA CCAGTCGCTG TTTCGCTTTG AGCAAATTTG GGCGGCGGCC GGGCATCCGC ATGGTGTGTT CCAGCTGTCG CCCTGGGAAC TGCAAGACCT GACCGGCGCG CCGGTCGCGG ACCTGGCGGT GGACGAGGAT GACAAAAAAC GGGAGTTGCA GCGCGCCATC AGCCTGGTCC GCCTGCGCGC CCCGACGCCG GACACGACGC TTGATGTGTC GTCTCCGTGC ATTTCCATCT GCCGCATGAA CGCAAGCTCA GGACTGTGCG AAGGCTGCTT TCGCACCCGC GACGAGATTG CCGGCTGGAG CGGCGCGACC GATGAGGGCA AGCGGGCGGT CTGGAAAATC ATCGAGCAGC GCATGGCGGC CCTGCAGACA TGA
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Protein sequence | MCGAELKVLP EGVQRVAAFL QDKGHMHAPV MLDDAARTAQ QAADALGVAV GQIAKSIIFR RKSDDAAVLV VTSGDRRVDE KKVEALVCLD GKRLGRADAA FVKSRTGFSI GGVSPLAHAT PSVTLIDQSL FRFEQIWAAA GHPHGVFQLS PWELQDLTGA PVADLAVDED DKKRELQRAI SLVRLRAPTP DTTLDVSSPC ISICRMNASS GLCEGCFRTR DEIAGWSGAT DEGKRAVWKI IEQRMAALQT
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