| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0478 |
|---|
| Symbol | |
|---|
| ID | 4687584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 499301 |
|---|
| End bp | 500053 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639833475 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_980721 |
|---|
| Protein GI | 121603392 |
|---|
| COG category | [R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein
[COG3313] Predicted Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTG CTGAACTGAA GGTGCTTCCA GAAGGCGTGC AGCGGGTTGC CGCGTTTTTG
CAGGACAAGG GCCACATGCA TGCGCCCGTG ATGCTCGATG ACGCCGCGCG CACCGCGCAG
CAGGCGGCCG ATGCGCTGGG CGTGGCCGTC GGCCAGATTG CCAAAAGCAT CATCTTTCGC
CGCAAGTCGG ACGATGCTGC AGTGCTGGTC GTGACCTCGG GCGACCGGCG CGTCGATGAA
AAGAAGGTCG AGGCGCTGGT CTGCCTGGAC GGCAAACGGC TGGGGCGCGC CGATGCGGCA
TTCGTCAAAA GCCGCACCGG CTTTTCGATT GGCGGCGTCT CGCCGCTGGC CCACGCCACG
CCGTCGGTCA CGCTGATCGA CCAGTCGCTG TTTCGCTTTG AGCAAATTTG GGCGGCGGCC
GGGCATCCGC ATGGTGTGTT CCAGCTGTCG CCCTGGGAAC TGCAAGACCT GACCGGCGCG
CCGGTCGCGG ACCTGGCGGT GGACGAGGAT GACAAAAAAC GGGAGTTGCA GCGCGCCATC
AGCCTGGTCC GCCTGCGCGC CCCGACGCCG GACACGACGC TTGATGTGTC GTCTCCGTGC
ATTTCCATCT GCCGCATGAA CGCAAGCTCA GGACTGTGCG AAGGCTGCTT TCGCACCCGC
GACGAGATTG CCGGCTGGAG CGGCGCGACC GATGAGGGCA AGCGGGCGGT CTGGAAAATC
ATCGAGCAGC GCATGGCGGC CCTGCAGACA TGA
|
|---|
| Protein sequence | MCGAELKVLP EGVQRVAAFL QDKGHMHAPV MLDDAARTAQ QAADALGVAV GQIAKSIIFR
RKSDDAAVLV VTSGDRRVDE KKVEALVCLD GKRLGRADAA FVKSRTGFSI GGVSPLAHAT
PSVTLIDQSL FRFEQIWAAA GHPHGVFQLS PWELQDLTGA PVADLAVDED DKKRELQRAI
SLVRLRAPTP DTTLDVSSPC ISICRMNASS GLCEGCFRTR DEIAGWSGAT DEGKRAVWKI
IEQRMAALQT
|
|---|
| |