Gene Pnap_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0477 
Symbol 
ID4686193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp498375 
End bp499301 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID639833474 
Productpyruvate carboxyltransferase 
Protein accessionYP_980720 
Protein GI121603391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC ATTTACCTTC CAGAGTCAAG CTCGTCGATG TCGGTCCCCG CGACGGCCTG 
CAGAACGAAA AATCGCCCGT TCCCGCCGCC GTGAAAATCG AACTCGTGCA TCGCCTGCAG
GACGCCGGTC TCACGGAAAT CGAGGTCACC AGTTACGTTT CGCCCAAATG GGTGCCGCAG
ATGGCTGACA ACGCCGAAGT CATGGCCGGC ATCCGGCGCA AGCCCGGCGT GCGCTATTCG
GTGCTGACGC CCAACATGCA GGGTCTAGAG GCGGCGATGA AGCCAGCGCC CGAGTTGTGG
CCCGACGAGA TCGTGGTGTT CGGCGCGGCC AGCGAAGCCT TCAGCCAGCG CAACATCAAC
TGCTCGATTG CCGAAAGCAT CGAGCGTTTC CGGCCGGTGG TGGCTGCGGC CCGGGCCAAC
AATATTTATG TTCGCGGCGC CATTTCCTGC ACCGTCGGCT GCCCCTACGA GGGCGAGATT
GCGCCGGAGC GCGTCGAAAT GGTGGCGCGC CTGATGAAGG ACATCGGCGT GCAGCACATC
GGCGTGGCCG ACACGATTGG CGTCGGCACG CCGCTGAAGG TGCAGCGCGC CCTGGAAGCG
GCGCTGAAGC ATTACGACCT CGATGGCGTG TCGGGCCATT TCCATGACAC CTACGGCCAG
GCGCTGGCCA ACACGCTGGC GTCGTTGCAA ATGGGCGTCT GGCAGTTCGA CACCTCGGTC
GCGGGCCTGG GTGGCTGCCC CTACGCCAAG GGCGCGACCG GCAATGTGGC GACGGAAGAC
GTGGTCTATC TGCTGCACGG CATGGGAATC GAAACCGGCA TCGACCTGGA CAAGCTGATT
GACGCGGGCA AGTTCATCAG CGACTTCCTC GGTCGCCAGC CCAACTCGCG CGCCGCGACG
GCCTTACTGA ACAAGAGGAT GAATTGA
 
Protein sequence
MTLHLPSRVK LVDVGPRDGL QNEKSPVPAA VKIELVHRLQ DAGLTEIEVT SYVSPKWVPQ 
MADNAEVMAG IRRKPGVRYS VLTPNMQGLE AAMKPAPELW PDEIVVFGAA SEAFSQRNIN
CSIAESIERF RPVVAAARAN NIYVRGAISC TVGCPYEGEI APERVEMVAR LMKDIGVQHI
GVADTIGVGT PLKVQRALEA ALKHYDLDGV SGHFHDTYGQ ALANTLASLQ MGVWQFDTSV
AGLGGCPYAK GATGNVATED VVYLLHGMGI ETGIDLDKLI DAGKFISDFL GRQPNSRAAT
ALLNKRMN