| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0471 |
|---|
| Symbol | |
|---|
| ID | 4690188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 491808 |
|---|
| End bp | 493415 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639833468 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_980714 |
|---|
| Protein GI | 121603385 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.50635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TAGACACCCA ACTCAACGCC CGTTCCGCCG ATTTCCAGGC CAACGCCGCC
GCCATGCGCG CGCTGGTGGA CGACCTTCAT GTGCAGCTCG CCAAATCGGC TGCGGGCGGC
GGCGAAGTCG CCCGCGCCCG GCACACGGCG CGCGGCAAGC TGCTGCCGCG CGACCGCGTG
CAGATGCTGC TCGACCCCGG AACGCCCTTC CTGGAAGTCG CGCCACTGGC CGCGCTCGGC
ATGTACAAGG GCGATGCGCC CTGCGCCGGG CTGATCGTCG GCATCGGCCG CGTCAGCGGC
GTGGACTGCA TGATCGTCTG CAACGACGCC ACCGTGAAGG GCGGCACCTA CTACCCACTG
ACCGTCAAGA AGCACCTGCG CGCGCAGGAA ATCGCCCAGC AGAACCACCT GACCTGCATC
TACCTGGTCG ATTCGGGCGG CGCCAATCTG CCCAACCAGG ACGAGGTGTT CCCCGACCGC
GACCACTTCG GCCGCATCTT CTTCAACCAG GCCAACATGA GCGCGCTCGG CATCTCGCAG
ATCGCGGTCG TCATGGGCTC GTGCACCGCA GGCGGCGCCT ACGTGCCGGC CATGAGCGAC
GAAAGCATCA TCGTCAAGAA CCAGGGAACG ATTTTCCTGG GTGGCCCGCC GCTGGTGAAG
GCCGCGACCG GCGAAGTCGT GACCGCCGAA GACCTGGGCG GCGGCGACGT GCACACCCGG
CTCTCGGGCG TGGCCGACCA CCTGGCGCAA AACGACATGC ATGCGCTGGC GCTGGCGCGG
GCTTCGGTGA AGAATTTGAA TAAAAATAAG GCTTTTGCGC ATGCTGGGCG TGCACCGATA
GCTCCTAAAT TTGTAGCGGA TGAGCTGTAC GGCGTGATTC CGGTCGATGT GCGCAAGCCC
TTCGACGTGC GCGAAATCAT CGCCCGCATC GTCGATGGCA GCGACTTTGA CGAGTTCAAG
GCGCGCTACG GCACCACGCT GGTCTGCGGC TTCGCGCATA TCGAAGGCAT GGCCGTCGGC
ATCATCGCCA ACAACGGCAT CCTGTTCAGC GAGTCGGCGC TCAAGGCAAC GCACTTCATC
GAACTGTGCT GCCAGCGCAA GATTCCGCTG GTGTTTTTGC AGAACATCAC CGGCTTCATG
GTCGGGCGCA AGTACGAAAA CGAAGGCATT GCCCGCAACG GCGCCAAGAT GGTGACGGCC
GTGGCCACGG CGGCGGTGCC GAAGTTCACC GTCATCATCG GCGGCAGCTT TGGCGCGGGC
AACTACGGCA TGTGCGGCCG GGCGTTCTCA CCGCGCTTTT TGTGGATGTG GCCGAACGCA
CGCATCAGCG TCATGGGCGG CGACCAGGCG GCCGGCGTGC TGGCGACCGT CAAGCGCGAC
GGCATCGAGG GCAAGGGCGG CGCCTGGACT GCCGAGGAGG AGGAGCATTT CAAGGCGCCG
ATCCGCAGCC AGTACGAGCA CCAGGGCCAT CCGTACTACG CCACCGCGCG CCTGTGGGAT
GACGGCGTGA TCGACCCTGC CGACACCCGC CGCGTGCTCG CGCTGGGGCT GAGTGCGTCG
CAGAACGCGC CGATTCCCGA AACGAAATTC GGCCTGTTCA GGATGTGA
|
|---|
| Protein sequence | MTTLDTQLNA RSADFQANAA AMRALVDDLH VQLAKSAAGG GEVARARHTA RGKLLPRDRV
QMLLDPGTPF LEVAPLAALG MYKGDAPCAG LIVGIGRVSG VDCMIVCNDA TVKGGTYYPL
TVKKHLRAQE IAQQNHLTCI YLVDSGGANL PNQDEVFPDR DHFGRIFFNQ ANMSALGISQ
IAVVMGSCTA GGAYVPAMSD ESIIVKNQGT IFLGGPPLVK AATGEVVTAE DLGGGDVHTR
LSGVADHLAQ NDMHALALAR ASVKNLNKNK AFAHAGRAPI APKFVADELY GVIPVDVRKP
FDVREIIARI VDGSDFDEFK ARYGTTLVCG FAHIEGMAVG IIANNGILFS ESALKATHFI
ELCCQRKIPL VFLQNITGFM VGRKYENEGI ARNGAKMVTA VATAAVPKFT VIIGGSFGAG
NYGMCGRAFS PRFLWMWPNA RISVMGGDQA AGVLATVKRD GIEGKGGAWT AEEEEHFKAP
IRSQYEHQGH PYYATARLWD DGVIDPADTR RVLALGLSAS QNAPIPETKF GLFRM
|
|---|
| |