| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0470 |
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| Symbol | |
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| ID | 4689870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 490052 |
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| End bp | 491791 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833467 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_980713 |
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| Protein GI | 121603384 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.500012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG AACATTCCGT GCCCCGTCCG GAAACAGCCC TGCTGACGCG CAGCTTTGCG
CGCGGCGCCA CCGACGTGCC GCTGATCGAG CAGCCCATAG GCGCATTTTT TGACGCCATC
GCGGTGCACC AGCCGAACCA TGAAGCGCTG GTCAGCGTTC ACCAGCGCCG CCGCTACACC
TACCTTGAAC TCCAGCGCGA GACCAATCGC CTGGCCAGCG CGCTGCTCAG CCTGGGCCTG
CAGCCCGGCG AGCGCGTCGG CATCTGGTCG CACAACAACG CCGAATGGGT CTTGATGCAG
CTGGCCACGG CCAAGGCCGG GCTGATCCTG GTCAACATCA ACCCGGCCTA CCGCACCGCC
GAAGTCGAGT ACGCGCTGAA CAAGGTCGAT TGCAAGGCGC TGGTCACCAT GGCGCGCTTC
AAGACCAGCG ACTACCTCGG CATGCTGCGC GAACTGGCGC CCGAGTGGGA ACACGGCCAG
CCCGGCCAGC TTGAATCCGC CAAGCTGCCG CACCTGCGCA GCGTGGTCTG GATCGACGAA
GCCGGGCAGG GCGATGAGCA GCCCGGATTG ACACGCTTCT CAAGCCTGCT GGCCAGCGGC
AACCCCGACG ACGCCCGGCT GGCCGCTTTG GCCTTCACGC TCCAGGCGAC CGACCCGATC
AACATCCAGT TCACCAGCGG CACCACCGGC TTCCCCAAGG GCGCGACGCT GACGCACCGC
AACATCCTGA ACAACGGCTT TTTCATCGGC GAGGCGATGA AGCTCACGCC GGCCGACCGC
CTGTGCATTC CGGTGCCGCT GTACCACTGC TTCGGCATGG TGCTGGGCAA CCTGGCTTGT
TTGACGCACG GCGCGACCAT CGTCTATCCG AACGACGGCT TTGACGCTTT AAGCGTGCTG
CAGACCGTGC AGGACGAGCG CTGCACCGGC CTGCACGGCG TGCCGACGAT GTTCATCGCC
GAACTCGACC ATCCGCGCTT TGCCGAGTTC GATTTGTCCA CCTTGCGCAC CGGCATCATG
GCCGGCTCGC CGTGCCCGAC CGAGGTGATG AAGCGCGTGG TGAACAGCAT GAACCTGGGC
CAGATCACGA TTGCCTACGG CATGACCGAA ACCAGCCCGG TCAGCTGCCA AAGCTCGATT
GACACGCCTT TGGCCAAGCG CGTCTCGACC GTCGGCCTGG TGCAGCCGCA CCTCGAAATC
AAGATCATCG ACCCCGAGAG CGGCGAGATC GTTCTGCCCG GCGTGTCGGG CGAATTCTGC
ACGCGCGGCT ATTCGGTCAT GCACGGCTAC TGGGACGACC CGGCGCGCAC GGCGGAATCG
ATTGACGCCG ACGGCTGGAT GCACACCGGC GACCTGGCGA CCATGGACTT TGAGGGCTAC
GTCAACATCG TCGGCCGCAT CAAGGACATG GTGATTCGCG GCGGCGAGAA CATCTACCCG
CGCGAGATCG AGGAGTTCCT CTACCGCCAT CCCAAGGTGC AGGATGTGCA GGTCGTCGGC
CTGCCCGACA AGCGCTACGG CGAGGAACTG TGCGCCTGGA TCGTCACGCG CCCCGGCGAA
ACCTTGAGCG AAGACGAGAT TCGCGCCTTC TGCAAGGGCC AGATCGCGCA CTACAAGGTG
CCGCGCTACA TCCGCTTCGT GCCGGGCTTC CCGATGACGG TGACCGGCAA GATCCAGAAG
TTCAGGATTC GCGACGAAAT GAAAACCCAG CTCGGGCTGG AAGAAGACAA AACCGCCTGA
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| Protein sequence | MSEEHSVPRP ETALLTRSFA RGATDVPLIE QPIGAFFDAI AVHQPNHEAL VSVHQRRRYT
YLELQRETNR LASALLSLGL QPGERVGIWS HNNAEWVLMQ LATAKAGLIL VNINPAYRTA
EVEYALNKVD CKALVTMARF KTSDYLGMLR ELAPEWEHGQ PGQLESAKLP HLRSVVWIDE
AGQGDEQPGL TRFSSLLASG NPDDARLAAL AFTLQATDPI NIQFTSGTTG FPKGATLTHR
NILNNGFFIG EAMKLTPADR LCIPVPLYHC FGMVLGNLAC LTHGATIVYP NDGFDALSVL
QTVQDERCTG LHGVPTMFIA ELDHPRFAEF DLSTLRTGIM AGSPCPTEVM KRVVNSMNLG
QITIAYGMTE TSPVSCQSSI DTPLAKRVST VGLVQPHLEI KIIDPESGEI VLPGVSGEFC
TRGYSVMHGY WDDPARTAES IDADGWMHTG DLATMDFEGY VNIVGRIKDM VIRGGENIYP
REIEEFLYRH PKVQDVQVVG LPDKRYGEEL CAWIVTRPGE TLSEDEIRAF CKGQIAHYKV
PRYIRFVPGF PMTVTGKIQK FRIRDEMKTQ LGLEEDKTA
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