| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0469 |
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| Symbol | |
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| ID | 4687068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 488880 |
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| End bp | 489941 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639833466 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_980712 |
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| Protein GI | 121603383 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.183121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAC TTTGCGCCAC GCCCGCCAGC CCGCGTCCGG CGCTTGAGCC CGCCATCACG
CCGATGGCCT TTGTGCAGGC GATTGCGCTG GCCTACGAGC GCCGCGGCCT GAGCCCGGCC
GCCGCGCTGG CGCAGGCACA AATCGCGCCG TCATCGCTGC ACGATGCATC GACCTGCATC
ACCGCCTGGC AGATGGAGCG CCTCTGCGGC ACGGCCATGC AGGAACTCGA CGACGAGGCG
CTGGGCTGGT TCAGCCGGCG CCTGCCCTGG GGCAGCTACG GCATGCTGGC GCGCGCCTCG
CTGAGCGCGC CCAGCCTGGG CGTGGCGCTC AAGCGCTGGT GCCGCCACCA CGGGCTGATC
GCCGACGACA TCGCCTTGAC GCTTTCGGTA TCCGGCGACA CCGCCCTGCT GGCGATCACC
GAGCAGCGCG ATTTGGGCGC CCTGCGCGAG TTTTGCCTGG TCTCGGTGCT GCGCAACATC
CTGGGCGTAG CCTGCTGGCT GATTGATTCG CGCATTCCGC TGCTGGGCGC GCAGTTTCCG
TTTGCCGCGC CGCCGCACCG GGATGTTTAC GCCGTGCTGT TTTCTGGCCC GACCGCATTC
GACACCGCGC CGGCCGGCCT GCGCTTTGAC GCCAGATACC TGGCGCTGCC GCTGCGGCGC
GACGAGCGCG CGCTGCAGCA GATGCTGGAG CGCGCGCTGC CGCTGACGGT GCTGCCCTAC
CGGCGCGACC GGCTGCTGGT GCAGCGCGTG CGCCAGGCGC TGGCCGCGAA TCCGGCGCAA
ACCCACAGCG CCCAAGCCCT GGCCGCGCTG GTCCATGTCT CGCCGCGCAC GCTGCACCGC
CAGCTGAAGG AAGAAGGCGC GTCGCTGCAG GCGCTGAAGG ATGAGGTGCG GCGCGCGCGG
GCGCTGGAGC TGCTACTGCG CACCCGCCGC CCCATCAAGC AGGTCGCCGA GGCCGCCGGT
TTCCAGAACG AAAAAAGCTT CATGCGGGCC TTCAAGACCT GGACCGGCCA GTCGCCGGCG
GAATTCAGGC GCGGCGGGCA AGGGCTAGAC TCCAGCGCTT GA
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| Protein sequence | MPELCATPAS PRPALEPAIT PMAFVQAIAL AYERRGLSPA AALAQAQIAP SSLHDASTCI
TAWQMERLCG TAMQELDDEA LGWFSRRLPW GSYGMLARAS LSAPSLGVAL KRWCRHHGLI
ADDIALTLSV SGDTALLAIT EQRDLGALRE FCLVSVLRNI LGVACWLIDS RIPLLGAQFP
FAAPPHRDVY AVLFSGPTAF DTAPAGLRFD ARYLALPLRR DERALQQMLE RALPLTVLPY
RRDRLLVQRV RQALAANPAQ THSAQALAAL VHVSPRTLHR QLKEEGASLQ ALKDEVRRAR
ALELLLRTRR PIKQVAEAAG FQNEKSFMRA FKTWTGQSPA EFRRGGQGLD SSA
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