| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0451 |
|---|
| Symbol | |
|---|
| ID | 4688417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 472320 |
|---|
| End bp | 472961 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639833448 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_980694 |
|---|
| Protein GI | 121603365 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTG AACCCAAAAC CTTCGAGGCG GCCATAACCG CGACCGATTT TTCAAGCGAG
GATTACTGCG GCACGAGTTA TGCGGCCAAG GTGCTCGGGT TGTCTGTCGC CACGGTCCAG
TCGCTGGTTG AAAAAGGTGA AATCGAAGCC TGGAAGACGC TGGGCGGCCA CCGGCGGATT
TCCCTGCATT CCCTCAATGC CTACCTGACC AAATACAGCC CGCAGCTCTC GCGGGCCGAT
CTTCATCCCA AGCACCGCTT GCGCGTGCTG GTGGTGGAAG ACGACGAGGC CGCGCGGGAT
TTGTACCGCT GCCATTTTGA AGAGTGGGAT CTGCCGGTTG ACTGCACCTG GATGTCATCG
GCGCTCGATG CGCTGATGGA TATCGCCAGC ATGCGGCCGG ATTTGCTCAT TGCCGACTTG
TCGATGCCGG GCGTCGATGG CATCGAGATG CTCAGAACCA TCAAACGCAA CCAGCATCTT
GCAGACATGC AGATTGTGGT GATCAGCGGC ATGGCGGTCG AGGCCATTGC CGCCCGTGGC
GGCCTTCCGC CACAAGCGCG CCTGGTGCAA AAACCGGTCA ATTTTGACTG GCTGCAAGGC
TACGTCACCG CACTGGTCAT GGCCAATGCC AAATGGCGCT GA
|
|---|
| Protein sequence | MLREPKTFEA AITATDFSSE DYCGTSYAAK VLGLSVATVQ SLVEKGEIEA WKTLGGHRRI
SLHSLNAYLT KYSPQLSRAD LHPKHRLRVL VVEDDEAARD LYRCHFEEWD LPVDCTWMSS
ALDALMDIAS MRPDLLIADL SMPGVDGIEM LRTIKRNQHL ADMQIVVISG MAVEAIAARG
GLPPQARLVQ KPVNFDWLQG YVTALVMANA KWR
|
|---|
| |