Gene Pnap_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0447 
Symbol 
ID4688260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp466315 
End bp467082 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID639833444 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_980690 
Protein GI121603361 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGA TTCGCTCCGT CCTGCACATG CTGTGGCTGA TCCTTACCGT GATTCCGTGG 
GCGCTGTTCG TGGTCATCGC CTCGCTGTTT GTCAACAGCA CCACCATGTA CTGGATGTGC
GCCCGCTGGC TCAAGCTGGC GGTGGACAGC GGCACCCTGA TCCTGGGCAT CAAGAACCGG
GTGACCGGCC TGGAAAACCT GCCCAGCGGC GAAAAAAGCG CCGCCGTCCT GCTGGTCAAG
CACCAGTCCA CCTGGGAGAC GCTGACCATG CCGGCGATCA TGCCGCACCC GCTGGCTTAT
GTGTTCAAGA AGGAACTGCT CTACATTCCA TTTTTTGGCT GGGCAATGGC ACGCATGGAC
ATGATTCACA TCGACCGCAG CCAGCGCGCA CAGGCCTTCA ACAAGGTCGT CGCGCAGGGC
AAGCGCCTGA TGGCGCAAGG CACCTGGGTG ATCATGTTTC CCGAGGGGAC GCGCATCAAC
CGGGGGCAAA AAGGCGTCTA TAAATCGGGC GGCACCCGGC TGGCCATCGA AACCGGCGCG
CCCGTGATCC CGATTGCCGT GACCTCGGCC CGGTGCTGGC CGCGCAAGGC CTTCATCAAG
AAGCCGGGCA TTGTCGATAT CTCCATCGGC AAGCCGATTC CCAGCGCGGG CCGCAAGCCC
GACGAGCTGA TGCGCGAAGT CGAAGCCTGG ATCGAGGCCG AAATGCGCCG GCTTGACCCC
GAAGCCTATG CCGGCCGTGA CGCCACGCCC GCCAGGGTTC GCTCCTGA
 
Protein sequence
MPLIRSVLHM LWLILTVIPW ALFVVIASLF VNSTTMYWMC ARWLKLAVDS GTLILGIKNR 
VTGLENLPSG EKSAAVLLVK HQSTWETLTM PAIMPHPLAY VFKKELLYIP FFGWAMARMD
MIHIDRSQRA QAFNKVVAQG KRLMAQGTWV IMFPEGTRIN RGQKGVYKSG GTRLAIETGA
PVIPIAVTSA RCWPRKAFIK KPGIVDISIG KPIPSAGRKP DELMREVEAW IEAEMRRLDP
EAYAGRDATP ARVRS