Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0444 |
Symbol | |
ID | 4688195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 462753 |
End bp | 464888 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833441 |
Product | glycine--tRNA ligase |
Protein accession | YP_980687 |
Protein GI | 121603358 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0906989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA AAAACCTTCT GGTCGAACTG TTCGTGGAAG AGCTGCCGCC CAAGGCGCTG AAAAAGCTCG GCGATGCCTT CGCCGGCGTG CTGGCCGAGC AGCTCAAGGC GCTGGGCCTG GCCACGGCTG AATCGGTGGT GACGGCCTAT GCCTCGCCTC GCCGCCTGGC CGCGCACATC AGCCATGTCT GGCTCAAGGC CGACGACAAG GCCGTGCAGC AAAAGCTCAT GCCGGTGTCG GTCGGGCTCG ATAGCGCCGG CCACGCCACG CCGGCGCTGC TGAAAAGGCT GCAGGCGCTG GGCGCCGACC TGTCCGATCC GGTGGCCGCT GTCGCCGCGT TGAAGCGCGC GCCCGATGGC AAGGCCGAAG CGCTGTTCTA CAACAGCCTG GTGACCGGCG CCACGCTGGA TACCGGCCTG CAGAAAGCGC TGGAGGAAGC GATTGCCAAG CTGCCGATTC CGAAGGTCAT GAGCTACCAG CTGGAAACCG ACTGCGAGCT GCCCGGCTGG ACCAGCGTGA ATTTCGTGCG CCCGGCGCAC GGCCTGGTCG CGCTGCACGG CAGCACCGTG GTGCCCGTCA AGGTGCTGGG CCTGAAGGCC GGCAACAGCA CGCGCGGCCA CCGCTTTGAA GCCGCCGTTG ACCCGGTGGT GCTGGCGGAC GCCGACAGCT ACGCCGTTAC CCTGGAAATC GACGGCGCGG TGATCGCCAG CTTTGCCCAG CGCAAGGCCG AGATCGCGCG CCAGCTGGCC GAGGCGGCCG CCGAACTGGG CGGCGGCGTC CAGCCGATTG AAGACGACGC CCTGCTCGAC GAAGTGACCG CGCTGGTCGA GCGGCCCAAT GTGCTGGTCT GCGAGTTTGA AAAAGAGTTC CTCGATGTGC CGCAGGAATG CCTGATCCTG ACGATGAAGG CCAACCAGAA ATACTTTCCG CTGCTCGACG CCGCAGGCAA GCTGACGAAC AAGTTCCTCG TCGTCAGCAA CATCAGCCCC GAAGACGCCA GCTTTGTCAT CGGCGGCAAC GAACGCGTGG TGCGCCCGCG CCTGGCCGAT GCGAAGTTTT TCTTTGACCA GGATCGGAAG AGGACGCTGG CTTCGCGCGT TGAAGGCCTG GGCAAAGTTG TTTATCACAA CAAGCTGGGC ACGCAGGGTG AAAGGACGGA GCGTGTCGCT GAAATCGCAG TAAAGATCGC TCAGTTACTT GAGGGTGACG CGCTAGCCGG GAAAGCTGGG AAGGCCGCTT GGTTGGCAAA GGCGGATTTA CTTACTGACA TGGTGGGCGA GTTCCCCGAA CTACAAGGAA CAATGGGGCG CTATTACGCG TTACACGACG GCCATAGTGC GGAAATAGCC GCTGCAATTG AAGATCACTA CAAGCCGCGC TTTGCCGGCG ACGAGTTGCC GCGCAACCCG GTCGGCGTGG TCGTTGCGCT GGCTGACAAG CTCGAAACGC TGGTCGGCAT GTTCGGCATT GGCAACCTGC CCACGGGTGA CAAAGACCCG TTCGCGCTGC GCCGCCATGC GCTGGGCGTG ATTCGGATGC TGGTTGAAAA AGACTTGCCG CTCGATTTGG GTGCTCTGGT GGGCGGCGCG GCTCCGGTGT TCGGCGACAA GATCACCGAT GCAACGCCAG CGTTGCTCGA CTTCATCTAC GACCGCCTAT CTGGCTCCCT GCGCGAACAA GGCTACAGCG CCCAGGAAGT CGATTCAGTC GTCTCCCAAA AACCGCAGCG CCTCGGCGAC GTGCCCAAGC GCCTGGCCGC CGTTCGCGCC TTCGCCGCGC TGCCCGAAGC CCCGGCCCTG GCCGCCGCCA ACAAGCGCAT CGGCAACATC CTCAAGAAGG AAGCGCTGGA AGTGGACCCG CATGTCAGCG AACTGCTGCT CAGGGAAGCG GCCGAAATCG CCCTGTATGC CGCGATGCGG GACGTGGTGC CCACGGCCAA TGCGCAGTTC GACACTGGTG ACTACACCGC CTCGCTGCAA ACGCTGGCCG CCTTGCGCGC GCCTGTCGAT GCCTTCTTCG ACGGCGTGAT GGTCAACGCC GAGGAACTCG ACCTGCGCCT GAACCGCCAG GGCCTGCTCA AAAGCCTGCA CAACGCCATG AACCGGGTGG CTGACCTGTC GCGCCTGGTG GCTTGA
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Protein sequence | MTTKNLLVEL FVEELPPKAL KKLGDAFAGV LAEQLKALGL ATAESVVTAY ASPRRLAAHI SHVWLKADDK AVQQKLMPVS VGLDSAGHAT PALLKRLQAL GADLSDPVAA VAALKRAPDG KAEALFYNSL VTGATLDTGL QKALEEAIAK LPIPKVMSYQ LETDCELPGW TSVNFVRPAH GLVALHGSTV VPVKVLGLKA GNSTRGHRFE AAVDPVVLAD ADSYAVTLEI DGAVIASFAQ RKAEIARQLA EAAAELGGGV QPIEDDALLD EVTALVERPN VLVCEFEKEF LDVPQECLIL TMKANQKYFP LLDAAGKLTN KFLVVSNISP EDASFVIGGN ERVVRPRLAD AKFFFDQDRK RTLASRVEGL GKVVYHNKLG TQGERTERVA EIAVKIAQLL EGDALAGKAG KAAWLAKADL LTDMVGEFPE LQGTMGRYYA LHDGHSAEIA AAIEDHYKPR FAGDELPRNP VGVVVALADK LETLVGMFGI GNLPTGDKDP FALRRHALGV IRMLVEKDLP LDLGALVGGA APVFGDKITD ATPALLDFIY DRLSGSLREQ GYSAQEVDSV VSQKPQRLGD VPKRLAAVRA FAALPEAPAL AAANKRIGNI LKKEALEVDP HVSELLLREA AEIALYAAMR DVVPTANAQF DTGDYTASLQ TLAALRAPVD AFFDGVMVNA EELDLRLNRQ GLLKSLHNAM NRVADLSRLV A
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