| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0434 |
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| Symbol | |
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| ID | 4687603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 448360 |
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| End bp | 449985 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833431 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_980677 |
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| Protein GI | 121603348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAT TGAACGACCC AATCAAGGAC GGCCTGCAGC GCGGCTGGAA AGTCTCGGGC
GGCGCCCTGG GGCCGATTCC AGAAAAAATC GTCTGCGATG TCGCCATCAT CGGCAGTGGC
GCGGGCGCGG GCATCACGGC CGAACTGCTG GCCAAGGCCG GGCTGCAGGT GGTGGTGATT
GAAGAGGGCC CGCTCAAGAG CAGCAGCGAC TTCAACCAGA AGGAGTCCGA AGCCTATCCT
TCGCTGTACC AGGAAAGCGC GGCGCGCAAG ACCGAAGACA AGGCGATCAA CATCCTGCAG
GGCCGCTGCG TCGGGGGCTC GACGACGGTG AACTGGACCA GCTCCTTTCG AACGCCGCCG
GCCACGCTCC AGTTTTGGCA GGACCAGTTT GGACTGGGCA GCTACACCGC CGAGGCGCTG
GCGCCTTATT TCGCCCAGGC CGAGCGGCGG CTGAACATTG CGCCGTGGCC GGTGGCGCCC
AACGAAAACA ATGAACTGCT GCGCCGTGGC GCCGTCAAGC TCGGGATTCC CGCCGCGTCC
ATCGCGCGCA ACGTCAAGGG CTGCTGGAAT CTGGGCTCGT GCGGACTGGG CTGCCCGACC
AACGCCAAGC AGTCGATGCT GGTCACGACG ATTCCGGCCG CGCTGGACCT GGGCGCGCAA
CTGCTGACCG AAACCCGGGC CGAGCGCTTC GAACTGGCCA ACGGCAGGGT GACGGCGCTG
GTGTGCCGAA ATGTAGAGCC AAATGGGGCT TTTGCGCAAT ATGGACGGGC GCAAACAGCT
ATTAAAATAA TAGCAAAACA TTATGTGCTG GCCGGCGGCG CCATCAACTC GCCCGCCGTG
CTGCTGCGCT CTGGCGCGCC CGACCCGCAT GGCCGGCTGG GAGTGCGGAC CTTTTTGCAC
CCGGTGCTCA TGTCTTCCGG CATCTTTGCG CAACAAGTCG CGGCCTGGAG CGGCGCGCCG
CAGTCGATCT ACAGCGACCA TTTTCTGCAA ACCCAGCCGA TGGACGGCCC CATGGGCTAC
AAGCTGGAGG CGCCGCCGCT GCATCCGCTG ATTTTTGCGT CCACCGTGCC GGGCTTTGGC
GAAGGGCAGC ATGCGCTGCT GAAGGCTTTT GCGCACAACC ACACCTTGCT GGCGCTGCTG
CGCGACGGCT TTCACGATGA AGCGCCCGGT GGCAAGGTCA GGCTGCGCGG TGACGGCTCG
GCCGTGCTCG ATTACCCGCT GAGCGACTAC GTCATGGACG GCGGCCGCCG GGCGCTGCTG
TCGATGATGC AGATCCAGTT CGCGGCCGGG GCGCAGCAGG TGCTGCCGCT GCACGAAATG
GCCGCGCCCT ACAGCTCCTG GGTGCAGGCA CGGGCTGCCG TCATGGCGCT GCCGATGAAG
CCGCGCCTGG TGAAAATCGT CAGCGCGCAT GTGATGGGCG GCTGCGGTCT GGCCGCCACC
GAAGCGCAGG GCGTGACGCG GCCTGACGGC CTGCATTGGC AACTGGACAA TCTCTCGATT
CACGACGGCT CGCTGTTCCC GACCAGCATA GGCGCCAATC CGCAGCTGTC GGTGTATGGC
ATGGTCAACC GCCTGGCGCA GGGACTGGCC AAAACGCTGA CCGGCCGGGA TGTGGCGCTG
GCCTGA
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| Protein sequence | MSRLNDPIKD GLQRGWKVSG GALGPIPEKI VCDVAIIGSG AGAGITAELL AKAGLQVVVI
EEGPLKSSSD FNQKESEAYP SLYQESAARK TEDKAINILQ GRCVGGSTTV NWTSSFRTPP
ATLQFWQDQF GLGSYTAEAL APYFAQAERR LNIAPWPVAP NENNELLRRG AVKLGIPAAS
IARNVKGCWN LGSCGLGCPT NAKQSMLVTT IPAALDLGAQ LLTETRAERF ELANGRVTAL
VCRNVEPNGA FAQYGRAQTA IKIIAKHYVL AGGAINSPAV LLRSGAPDPH GRLGVRTFLH
PVLMSSGIFA QQVAAWSGAP QSIYSDHFLQ TQPMDGPMGY KLEAPPLHPL IFASTVPGFG
EGQHALLKAF AHNHTLLALL RDGFHDEAPG GKVRLRGDGS AVLDYPLSDY VMDGGRRALL
SMMQIQFAAG AQQVLPLHEM AAPYSSWVQA RAAVMALPMK PRLVKIVSAH VMGGCGLAAT
EAQGVTRPDG LHWQLDNLSI HDGSLFPTSI GANPQLSVYG MVNRLAQGLA KTLTGRDVAL
A
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