| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0419 |
|---|
| Symbol | |
|---|
| ID | 4687660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 435689 |
|---|
| End bp | 436183 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639833416 |
|---|
| Product | IS4 family transposase |
|---|
| Protein accession | YP_980662 |
|---|
| Protein GI | 121603333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.216929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCATCG GCGACCGCGA GTCGGACATG CTGGAGATGA TGGTCAAGGC GCGCGATCTG
GGCTACCCGG CTGACTACTT GGTGCGCAGT CAGCACAACC GGGTGCTGCC AAGCGGCGGC
AAGCTGTGGG ACAAGGTGAT GGCGCAACCG CCAGTCGGGC GCATCCGCTT CATGCTGCCA
GCCGGACGAG GCCGAAAGAG CCGCACGGTC GAGCAGGACA TCCGCATTGA GCGCGTCCAG
CTGAGCGACA AGGCCAAAGG GGCCATCGAG GTCAGCTGCC TGGTGGCCTC GGAGGTCAAC
GCCCCGGCAG GCGTCAAGCC CGTGGTCTGG CGGCTGCTGA GCAACCGCGT GGCCAGCACA
CTGGAACAGG CCAGCGAGCT GATCGACTGG TACCGCTCGC GCTGGGAAAT TGAGCTGTTT
TTCTTGATTC TCAAGGAGGG CTGCCGAGTC GAGCGGCTGC AGCTGAGCGA CAAAGATATT
GATCCGGCCC AATGA
|
|---|
| Protein sequence | MCIGDRESDM LEMMVKARDL GYPADYLVRS QHNRVLPSGG KLWDKVMAQP PVGRIRFMLP
AGRGRKSRTV EQDIRIERVQ LSDKAKGAIE VSCLVASEVN APAGVKPVVW RLLSNRVAST
LEQASELIDW YRSRWEIELF FLILKEGCRV ERLQLSDKDI DPAQ
|
|---|
| |