| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0418 |
|---|
| Symbol | |
|---|
| ID | 4689531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 434614 |
|---|
| End bp | 435651 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639833415 |
|---|
| Product | ISXo7 transposase |
|---|
| Protein accession | YP_980661 |
|---|
| Protein GI | 121603332 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.105667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAG AAAATGCAAG AAAGCAGACG CTGGAGCAGC TTCACGAGCG GCGCAAGCAA
GTCGTGAGAC TGCATAAAAG GGCAATGGGC GTCATGCAAA TTGTCTCCAT GACGGGTTTG
AGCTACCCGG CTGTGCGCAG GTGCATCGAC CTGTTCGATG AGGGCGGCTG GCCAGCAATA
CGACCGGCCT TGCGTGGGCG CACTCAAGGT CTGGGGCGCA CCCTGAGCCA GGCTCAGGAG
GACAGCCTTC AGCGCAGCAT CATCGATCAA CGCCCTGAGC AGCTCAAGAT GGATTTTTTC
CTGTGGAGCC GGGCGGCCGT AGGCCAGCTC ATCGAGCAGG AGTACGGCAT CGAGCTGCAG
GTGCGCAGCG TTGGCAAGTA CCTGGCCCGC TGGGGTTTTA CGCCCCAAAA GCCCATCAGG
CGAGCCTACG AACAAAGCCC TGAAGCGGTG CAGGCCTGGC TCGAAGGCGA GTACCCGGCG
ATAGAGCAAC GCGCCCGCCA GGAAGGCGCT GAAATCCATT GGGGTGACGA GACGGCGCTG
GTGAACACCG ATGTGCGCGG TAGAAGCTTT GCGCCTGCTG GAAAGACACC GGTGGCCAGA
ACCGTGGGAG GCACCCGGCA AAAGCTCTCG ATGATTGCCA CGGTGACTAA CCAGGGGAAA
ACCCGCTGGA TGATCATTGA CGATGCGTTT GACGCGGACA AGCTCATCGA ATTCCTGCGG
GCACTGGTCA AGGATGCGGG CAAAAAGGTA TTTTTGATAC TGGACAACCT GCGGGTTCAT
CACAGCAAAA TCGTCAAGGC CTGGGTGGCT AACCACAGGG ACGAAATTGA GCTGTTTTAT
CTGCCCAGCT ACAGCCCTCA GCTCAATCCG GAGGAACGCC TCAATGCGGA TCTGAAGCAG
GAGATGGGCA AACGCGTACC GGCGCGCAGC AAAGCCAAAT TACGCGATGC CGCCAACGAG
CACATGGCTC TGCTCGAGCG CACGCCTGAG CGAGTTATCG CCTACTTTCA GGATCGGCGT
GTTCGCTATG CCGCTTAA
|
|---|
| Protein sequence | MEKENARKQT LEQLHERRKQ VVRLHKRAMG VMQIVSMTGL SYPAVRRCID LFDEGGWPAI
RPALRGRTQG LGRTLSQAQE DSLQRSIIDQ RPEQLKMDFF LWSRAAVGQL IEQEYGIELQ
VRSVGKYLAR WGFTPQKPIR RAYEQSPEAV QAWLEGEYPA IEQRARQEGA EIHWGDETAL
VNTDVRGRSF APAGKTPVAR TVGGTRQKLS MIATVTNQGK TRWMIIDDAF DADKLIEFLR
ALVKDAGKKV FLILDNLRVH HSKIVKAWVA NHRDEIELFY LPSYSPQLNP EERLNADLKQ
EMGKRVPARS KAKLRDAANE HMALLERTPE RVIAYFQDRR VRYAA
|
|---|
| |