Gene Pnap_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0416 
Symbol 
ID4687646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp433656 
End bp434240 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID639833414 
Producttransposase IS66 
Protein accessionYP_980660 
Protein GI121603331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0584328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATGGC TCAAACCCGG CAATGGCAAA ACGCACCGGG CTTATCTCTG GGCCTACGCG 
CCGGGCGCCT TTGAAGATTT GAAGGCCGTG GTCCATGACT TTTGCGAGAG CCGCGCGGGC
GCGCATGCCA GAGGCTTTCT GGGTGCTTGG CAAGGCACGC TGGTGTGCGA CGATTACGTG
GCCTACAAGC AGCTGTTCAC GCAGGGCATC ATGGAGTCCG GCTGCATGGC GCACGCCAGA
CGTCACCTCT TCGAGTTGCA TGTCAATCAC CAGAGCCAGA TTGCCGCTCA AGCGCTGCAC
TACATCGCCC AGCTCTACGA GATCGAGCGC GAGGTCAAAA CCCTGCGCGC GGATGAACGC
CAACGCATCC GCCAGGCCCG GTCAAAACCG CTGGCCGATG CGCTGCACCA ATGGATGGTG
CTTGAGCGCA GCCAGATACT GGACGGCTCA GCCACGGCCA AGGCACTCGA TTACAGCCTC
AGGCGCTGGG GCGCGCTCAT GCGTTTCCTG GATGACGGGC AATTACCGAT CGACAACAAC
TGGGTGGAAA ACCAAATCCG GCCCGTGGCA ATGGCGTGTT CATAA
 
Protein sequence
MGWLKPGNGK THRAYLWAYA PGAFEDLKAV VHDFCESRAG AHARGFLGAW QGTLVCDDYV 
AYKQLFTQGI MESGCMAHAR RHLFELHVNH QSQIAAQALH YIAQLYEIER EVKTLRADER
QRIRQARSKP LADALHQWMV LERSQILDGS ATAKALDYSL RRWGALMRFL DDGQLPIDNN
WVENQIRPVA MACS