Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0411 |
Symbol | |
ID | 4686751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 420397 |
End bp | 420855 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639833404 |
Product | hypothetical protein |
Protein accession | YP_980655 |
Protein GI | 121603326 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000404723 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGTGGC GAAATGGACA AGCCTATGCA CAGGATTTGC GCGACCGGGT GCTGGCCGCG CCAGGCGTGC TGCGCGAGGT CGCCGAGCGC TTTGGCGTGA GCCAGGCCTA TGTCTGCCGG GCGCGGGCAC GCCGCGAGCG GCTCGGCCAG ACGGGCCCGG GCGCGCAGCA TAACCACATG CCGCTGCGCC TGGCCGCGCT GGAGGGCGCG CTGCGCGAGC AGGTCGCCAG AGCGCCGGCG CAGACGCTGC GCGAGCTGCG TCAGTGGGTG CGTGCCGAGC ACGGCATCGA GGTAGGCACC ACCACGATGT TCAAGACCCT GAGGCGGTTC GGGCTGACGC TAAAAAAAAA TCACCCTGCA CGCGGCCGAG CAAACGCGGC CCGACGTCGC CCAGGCCCGC CAGGACTGGA GCGCCAGACA ACCAAGCCTG CCGGCCGCTC GGCTGATCTT CCTCGATGA
|
Protein sequence | MSWRNGQAYA QDLRDRVLAA PGVLREVAER FGVSQAYVCR ARARRERLGQ TGPGAQHNHM PLRLAALEGA LREQVARAPA QTLRELRQWV RAEHGIEVGT TTMFKTLRRF GLTLKKNHPA RGRANAARRR PGPPGLERQT TKPAGRSADL PR
|
| |