| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0405 |
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| Symbol | |
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| ID | 4686538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 404675 |
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| End bp | 407608 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833398 |
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| Product | hypothetical protein |
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| Protein accession | YP_980649 |
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| Protein GI | 121603320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.510734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0110299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATTC ATAAACCTAC CCATCGCACC GGCGCCAAGC CGGCAGCGAC ATGGGCGGGT
GCCGCAGCGC TGTCGTTGGG TTTCCTTTTT GGAAGTCCGG CTGCCTTCGC TGTTGCCCCA
CTCGCCAATA CCGTCATCGG TAACCAGGCG TCCGCCTCGT ACACCGACCC GAACGGAATC
ACCCAGCTGG CCTCATCGAA TCTGGTGCAA ACCACGGTCC AGCAGGTCGG CTCTTTCAAC
CTCGATGCAC GCACTTCGAA CACGACTGAC GTTATCAACA CCAAGACCGG TGCTGCAGGC
ATTACGGTTT ACGCACCTCA CGTGCTGACC AACACGGGCA ATGGCGCTGA TGGCTTCAAC
ATCAGCATTA CTTCCCCTGC CGCAGGCTTC TCAAGGGTAG AAGTGTTCGC CGACGCCAAT
GGCGACGGTT TGCCCGACAA CACCTCGGCG CTGTGTACTG CCGTACCGGC TGCAACTTGT
TCCGTGCCTA CCCAGACGGT TGCTGGCAAC AATGGCGTAT TCCAGTTCGT GGTGGCCTAC
TCGATCCCCA CCACCGCCAC CACCGCCACC ACGCCGACCA CCCCGTTCAA TGTTGGTACG
GTCACGGCTG TCGTGGTGCC AAGCTCGCCT GTGCTTGCCA GTTACAGCAG CACCACGGCG
GCTGACGTTG ACAACGTCAA CCTGACCACC GTGGCGGCCT TCAATGCCAC CAAGGCCATC
GGCTCGCCTG CCGTGGCATG GTCCGCGAAC GGCGGTGTCT GGCCAGTCGC TACCAGCACG
GGTCCGCGCT CGGTCACGGG CTGCGCCTTG ACCAATGCAG GCGCTGCCGC CCCTGCTGCG
GGTTGTGTCT ATACGACCTA CACCCTCAAC TTGAGCAACA CGGGTGGTGC CGTGGGCACG
ATGGCCGTTT CCGATACGCT GCCCTCCGGT TTCACCTATG TGCCCGGTTC AGCTGTCTGG
AGCAACGCTC CAGGCACTGC CCTGACCGAT GCTGCATTGG GTGACACTAC CGGCATCGAC
TTCCGGGCCA CGGGCAATAC CGTGACGGCA GTCGTTGCGG CGCTGAACCC GAATGTGACG
CAATCCGTCA GCTTTGTGGT GTTGGTCAAT GAAACGGCTC TCATCGGCAC GTCCACCACC
ACCAACACGG CGACGTACAA CCCAGTCGAT GCACCGGCCG CAACCTCGAC CGCGCCAGGC
ACTCTGGGTT CAAGCACCAA TCCAGCCGCT TACACCGTGA CGGCAAGCTA CAGCATCGTG
CTGGGCGCCA CGGCCTCGAC CGCAGTGACT GCAAAGGACA CGGTAGCCGG CACGCCTAAT
GGCACTACTG CCGACTTGAC GATTCAGCCA TCGGTTTCTC CTGGTGGCAG CGTCCTCTTC
ACGCAGACGG TTTACAACAC GGGTAACGCC ACCGACACGG TGAACGTCAC GGCCCTGGCC
TCGACGTTCC CGGCAGGCAC CACGTTCCAG TTCTTCGACG CCGGCGGCGT GGTGGCATTG
CTCGACACCA CGGGTGACGG CATTGTGGAT ACAGGGCCAA TTTCGGCAAG CGGCAGCGTG
AACATCATCA TCCGCGCCAA TGTTCCGGCT GGCGTAACCG CTGCGGGTCC GTTTGTCGTG
AATGTGCGCG GTGTTTCCGC TAACGACACG AGCAAGATCG ACGCAACGCA AGACCAGGCA
ACTGCGCTGG TGGCTCCTTC CTCGCTGATC GATCTGACCA ATACTGCCGT CGGCACTGGC
ATCGGTAACG TCGGTTCTGG TGACCTGGGC GCAGGTCCAA GCCCATCGCC AACGACGACG
GTGAGCACAC CGGCTGGTTC ATCTGCACTG TTCACGCTGT TCCTCAAGAA CAACGATACA
ACGGCCAACA GCTACAACCT GTTGGCCAGC CAGACAGCGG CTTTCCCCGG CTCCCTGCCA
ACAGGCTGGA CCGTGAAATA TGTGGCCGGC GGCGCCACCT GCTCTGCTGC CGCAGTGACT
CAGCCTGTGG CTGTCGCCGT GGGTGCGCAA GTGCAGGTTG ACGCCTGCGT GACGCCGCCT
GTGACGCAAA CGCCAGTAAC CGCTCAGCCG ATGTATTTCC GTGTCACCTC GACAGCTGTA
GCCACCACCG GCGCCATCGT TTCCGATACG AAGCTCGATG CGGTCACCGT GACGACTGCC
ATGACCTTTG GCGCTACCCT GACGCCTGAC AACAACGGTC AGGTCGCCGC AGGCGGCTCC
GTGGTGTATG CCCACACGCT GACCAGCACC GGCGCGCAAT CTTGCGGTGC CTACACATTG
GCCGCTTCGC CTACCTCGGC TGACATCACC CTGGGCTGGA CTACCGTCAT CTATGTTGAC
GTCAATGGCG ACGGCCAGCT TGATGCAGGT GACACGCTGT ACAGCGGCAG CTCGCTGAGC
CTCGCAACTG GCGCTACGCA AAAACTGCTC GTCAAGGTGT TCGCACCCGG CGGCGCAGCG
GCAGGCGCAG CGGATGTGGC AACCGTGACG GCAACATTCG CGGCCAATTG CGGCGCACCT
TCGGCAACCG ACACCAGCAC CGTCATCACG GGCCAGATCC GTCTGGTGAA GACGCAGGTG
TTGAATGCGG CTGTGGCGGG TACTTGCCCG GCAGTTCCTG CAACGCCGGC TTTCAGTGCT
GCGCCCATCA TGGCTGCCAA GCCTGGCGAC TGCATTGTTT ACCGCGTGGT TGCCACCAAC
GAAGGTGCCG CTCCAGTGAG CAATCTGGCG ATCAACGATG CCATTCCAGC CTACACCGGC
CTGACGGGTG CAACGCAGCC GACTGTGCAA TGCACGTCCA CCGGGATCAC CGCCGCGTTG
ACCACGGCTA ACTACGCATC CACCGCTGTT GCGGTGAGTT GCGGCAGTGC CACCAACACG
GTAATTCCTG GCGGCTCTGC GACGATGACC TTCTCCGTGA AGATCAATAA CTAA
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| Protein sequence | MIIHKPTHRT GAKPAATWAG AAALSLGFLF GSPAAFAVAP LANTVIGNQA SASYTDPNGI
TQLASSNLVQ TTVQQVGSFN LDARTSNTTD VINTKTGAAG ITVYAPHVLT NTGNGADGFN
ISITSPAAGF SRVEVFADAN GDGLPDNTSA LCTAVPAATC SVPTQTVAGN NGVFQFVVAY
SIPTTATTAT TPTTPFNVGT VTAVVVPSSP VLASYSSTTA ADVDNVNLTT VAAFNATKAI
GSPAVAWSAN GGVWPVATST GPRSVTGCAL TNAGAAAPAA GCVYTTYTLN LSNTGGAVGT
MAVSDTLPSG FTYVPGSAVW SNAPGTALTD AALGDTTGID FRATGNTVTA VVAALNPNVT
QSVSFVVLVN ETALIGTSTT TNTATYNPVD APAATSTAPG TLGSSTNPAA YTVTASYSIV
LGATASTAVT AKDTVAGTPN GTTADLTIQP SVSPGGSVLF TQTVYNTGNA TDTVNVTALA
STFPAGTTFQ FFDAGGVVAL LDTTGDGIVD TGPISASGSV NIIIRANVPA GVTAAGPFVV
NVRGVSANDT SKIDATQDQA TALVAPSSLI DLTNTAVGTG IGNVGSGDLG AGPSPSPTTT
VSTPAGSSAL FTLFLKNNDT TANSYNLLAS QTAAFPGSLP TGWTVKYVAG GATCSAAAVT
QPVAVAVGAQ VQVDACVTPP VTQTPVTAQP MYFRVTSTAV ATTGAIVSDT KLDAVTVTTA
MTFGATLTPD NNGQVAAGGS VVYAHTLTST GAQSCGAYTL AASPTSADIT LGWTTVIYVD
VNGDGQLDAG DTLYSGSSLS LATGATQKLL VKVFAPGGAA AGAADVATVT ATFAANCGAP
SATDTSTVIT GQIRLVKTQV LNAAVAGTCP AVPATPAFSA APIMAAKPGD CIVYRVVATN
EGAAPVSNLA INDAIPAYTG LTGATQPTVQ CTSTGITAAL TTANYASTAV AVSCGSATNT
VIPGGSATMT FSVKINN
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