| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0403 |
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| Symbol | |
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| ID | 4686473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 401856 |
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| End bp | 403277 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833396 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_980647 |
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| Protein GI | 121603318 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0790125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGA AGACCGCTTC CCAATCCCTG ACCGAGCAGC TCTGCGCGCG CTTTGCCGAC
CGCATTCGCA ACCGTTTGCT GGCGCCGGGC GCGCGCCTGC CCTCGGTGCG GCTGTGCGCC
GAGCAGCAGG GCGTGAGCGT TTCCACGGTG GTGGCCGCTT ATGACCAGCT GCAGGCGCAG
GGGCTGGTGG TGGCGCATAA GAATCGCGGC TTTTTTGTCC GGGATTTGGC ATCAAATATG
CCTTTTGTGC ACGCTGGTAA AGCGCAATTA GCTATAAAAA CAATAGCAAA TACACCCGTC
GATGCCGCAG CACTGATTCG CGGCATGTTT CACCCGATCA GCGACAAGCC GCAACCCGGC
ATGGGCGTGT TTCCGGCGCA GTGGCTGGAA TCGAGCTTCA TGCCGGCAGC GGTGCGCAAG
GCCACCGGCG CCAGCGCGCT GCGCGATCTG TCGCTCAACT ATGGCGAGCC CAAGGGCGAC
AGCGGCCTGC GCCGCGCGCT GTCGCAAAGG CTGGGCGCGC TCAATATCCA TGCCGATCCG
AGCCAGATCA TCACCACCGT CGGCGCCACC CACGCGCTGG ACATCATCAG CCGCACGCTG
CTGCGCGCGG GCGACTATGT GATGGTCGAG GAGCCCGGCT GGGCGGTGGA ATTTGCCCGG
CTCGATGCGC TGGGCATGCG CATTTTGCCG GTGCCGCGCC GCGCTGACGG ACCCGACCTC
GAGGTGATGG CGCAGTACTG CCAATTGCAC AGCCCCAGGC TGTTTGTCAG CGTCAGCGTG
TTCCATAACC CGACCGGCTA CTGCCTGGCG CCGGGCAGCG CCCACCGGCT GCTGCAACTG
GCCAGCCAGC ACAATTTTCA CATCGCCGAG GACGACACCT ACAGCCACCT GGCGCCCGAT
CACGCCACGC GGCTGTGCGC GCTCGACGGC CTGCAGCGCA CGATTTACGT CAGCGGTTTT
TCGAAAATTC TGGCGCCCGG CTGGCGCGTG GGCTTCATGG CCGCGCCGCC GGAGTTGGTC
GAGCGCTTGC TCAACACCAA GCTGCTCGCC ACCCTGACGA CGCCCGCGCT GCTGGAAAAA
GCGCTGGCCT GGTGCATCGA GCAGGGCCAG TTGCGCCGCC ATGCCGAACG CATCCGCACC
CGGCTCGACC AGGCGCGCGC CCGCAGCGTC AAGCTGGCGC TGGCGCATGG CTGCACCTTC
GCGGCCGAGC CGGCCGGCCT GTTCGGCTGG GTCGAGACGG GCGTGGACAC CGACGCGCTG
GCGCAGCGCA TGCTCGACGA GGACTATTTG ATTGCCCCCG GCGCGCTGTT TCATGCGGTG
CGCAAGCCGA GCACCCTGAT GCGCATCAAC TTCGCGACCA CGCAGGAGGC GGCGTTCTGG
GCGGTGTTCG CACGCCTGCG GGATGGGGCG TACCGGTTGT AA
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| Protein sequence | MLMKTASQSL TEQLCARFAD RIRNRLLAPG ARLPSVRLCA EQQGVSVSTV VAAYDQLQAQ
GLVVAHKNRG FFVRDLASNM PFVHAGKAQL AIKTIANTPV DAAALIRGMF HPISDKPQPG
MGVFPAQWLE SSFMPAAVRK ATGASALRDL SLNYGEPKGD SGLRRALSQR LGALNIHADP
SQIITTVGAT HALDIISRTL LRAGDYVMVE EPGWAVEFAR LDALGMRILP VPRRADGPDL
EVMAQYCQLH SPRLFVSVSV FHNPTGYCLA PGSAHRLLQL ASQHNFHIAE DDTYSHLAPD
HATRLCALDG LQRTIYVSGF SKILAPGWRV GFMAAPPELV ERLLNTKLLA TLTTPALLEK
ALAWCIEQGQ LRRHAERIRT RLDQARARSV KLALAHGCTF AAEPAGLFGW VETGVDTDAL
AQRMLDEDYL IAPGALFHAV RKPSTLMRIN FATTQEAAFW AVFARLRDGA YRL
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