| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0401 |
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| Symbol | |
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| ID | 4686411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 399420 |
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| End bp | 400640 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833394 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_980645 |
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| Protein GI | 121603316 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0793371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA CCCAGGCGCG ACGTGCGCAA AAAATGAACC CCTCGGTGAT CCGCGAGATC
CTGAAGGTCA CTGAAAAGCC CGGCATCATC AGCTTTGCCG GCGGCCTGCC CTCGCCCAAG
ACCTTTCCGG TCAGCGCCTT CAGCGCGGCC TGCGAAAAGG TGCTGCGCGA AGACGGCCAT
GCGGCGCTGC AGTACGCGGC CAGCGAAGGC TATGCGCCCC TGCGCGAGAT GGTAGCCAGC
ATGCTGCCGT GGAATGTGGA CCCGGCATTG GTCCTGATCA CCACCGGCTC GCAGCAGGGG
CTGGACCTGA TCGCCAAGGT GCTGATCGAC GAGGGCAGCC GCGTGCTGGT CGAGACGCCG
ACTTACCTCG GCGCGCTGCA GGCCTTCACG CCCATGGAGC CCGAGATCGT CAGCGTGGCC
AGCGACGACG GCGGCGTGGA CATTGCCGAT CTGGCCGCCA AGGCAGAAGG CGCACGCTTT
TTCTACGTGC TGCCCAATTT CCAGAACCCG ACCGGCCGCA CCATGCCCGA GGAGCGCCGC
GCCGCGCTCA GCGCCGAGGC CGCGCGCCTG GGCCTGCCGC TGGTCGAGGA CAACCCCTAC
GGCGACCTGT GGTTCGACAC GCCGCCGCCG CTGCCGCTGA CCGCGCGCAA TCCCGAGGGC
TGCGTCTATC TGGGATCGTT TTCCAAAGTG CTCGCGCCCG GACTGCGGCT GGGCTTCATG
GTGGCGCCCG CCTCCATCTT CCCCAAGCTG CTGCAGGCCA AGCAGGCCGC CGACCTGCAC
AGCCCCGGCT TCAACCAGCG GCTGGTGGCC GAGGTGATGA AGGACGGCTT CCTGGACCGC
CATGTGCCGA CCATCCGCGC CCTGTACAAA TCCCAGCGCG ACGCCATGCT GGCCGCCATG
GTGCGCGAGA TGCCCGAAGG CGTTGAATGG AACACCCCGG CCGGCGGCAT GTTCCTGTGG
GTGCGCCTGC CCGAGGGCAT GAATGCGATT GAACTGCTGC CCAGGGCGGT CGAGCGCAAT
GTGGCCTTTG TTCCGGGCTG GGCGTTTTAT GCCGACCAGC CCGACGCGCG CACGCTGCGC
CTGTCCTTCG TGACTTCCAG CGTGGCGCAG ATCGACATCG GCATTGCCGC GCTGGCCGGC
GCCATTCGCG AGATGCGCGC CGGATCAAGC GCTTCGGTTG CAGGCGCCGC CCCGCAACTT
GAAGCGCAGC CCCAGACCTG A
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| Protein sequence | MKWTQARRAQ KMNPSVIREI LKVTEKPGII SFAGGLPSPK TFPVSAFSAA CEKVLREDGH
AALQYAASEG YAPLREMVAS MLPWNVDPAL VLITTGSQQG LDLIAKVLID EGSRVLVETP
TYLGALQAFT PMEPEIVSVA SDDGGVDIAD LAAKAEGARF FYVLPNFQNP TGRTMPEERR
AALSAEAARL GLPLVEDNPY GDLWFDTPPP LPLTARNPEG CVYLGSFSKV LAPGLRLGFM
VAPASIFPKL LQAKQAADLH SPGFNQRLVA EVMKDGFLDR HVPTIRALYK SQRDAMLAAM
VREMPEGVEW NTPAGGMFLW VRLPEGMNAI ELLPRAVERN VAFVPGWAFY ADQPDARTLR
LSFVTSSVAQ IDIGIAALAG AIREMRAGSS ASVAGAAPQL EAQPQT
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