Gene Pnap_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0400 
Symbol 
ID4686316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp398447 
End bp399379 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID639833393 
ProductPhzF family phenazine biosynthesis protein 
Protein accessionYP_980644 
Protein GI121603315 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0723912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC GCCTGTTCAA GCAAGTTGAC GTTTTTACTT CCACGCCCTA CCTGGGCAAC 
CCGCTGGCGG TGGTGCTTGA CGGCAGCGGG CTGGACGACG AGGCGATGCA GCGCTTTGCG
CGCTGGACCA ACCTGTCGGA AACCACGTTT TTACTGCCAC CGGCCGATGC GTCGGCCGAC
TACCGGGTGC GCATCTTCAC GCCCGGCGGC GAGTTGCCTT TTGCCGGCCA CCCGACGCTG
GGCAGCTGCC ACGCCTGGCT GCAGGCGGGC GGCCAGCCAA AATCCAGGGA TTTCATCGTC
CAGGAATGCC AGGTCGGGCT GGTGAAAGTG CGGCGTGAAG GCCCTCGCCT GGCCTTTGCC
GCGCCGCCGC TCAGGCGCTC GGCCCCCAGC CCCATGCTGC TGCCCAGGGT CGCCGCGGCG
CTGGGCCTGA AGGCGCACCA GATTCTGGCG GTCCAGCAAC TGGACAACGG CCCGGTCTGG
CTGGGCCTGC TGCTGGACAG TCCCGATACC GTGCTGCAGC TCAACATCAA TCACCTCGCG
CTGCAGGCGC TGCAGGTTCA CATCGGCGTT GCAGCGGTTT ACCCTGCGGC CGAAGCGGCC
CCGCTGATTG CCCGCGCCAA CCGCGAAGCG CGTGCCTTTG GGCAGACGCC CCTCCCCACG
GCCACCCTTG CGCAAGCGCC CGACCTTGAA GTGCGCGCGA TTGTCGCGTC CACCACCGTC
TATGAAGACC CCGTCACCGG CAGCCTCAAT GCCGGCCTGG CGCAGTGGCT GATGGCCGAT
GGCCACATGC CCGAGCGCTA CCTGGCGTCG CAAGGCCTGT GCCTTGGCCG CGCCGGCCAG
GTGCATCTGG AGCGCGATGC GCAAGGCCAG GTCTGGGTCG GCGGCGATTC GGTGACCTGC
ATCGACGGCC AGGTCATGCT GGGATCGAAT TGA
 
Protein sequence
MTPRLFKQVD VFTSTPYLGN PLAVVLDGSG LDDEAMQRFA RWTNLSETTF LLPPADASAD 
YRVRIFTPGG ELPFAGHPTL GSCHAWLQAG GQPKSRDFIV QECQVGLVKV RREGPRLAFA
APPLRRSAPS PMLLPRVAAA LGLKAHQILA VQQLDNGPVW LGLLLDSPDT VLQLNINHLA
LQALQVHIGV AAVYPAAEAA PLIARANREA RAFGQTPLPT ATLAQAPDLE VRAIVASTTV
YEDPVTGSLN AGLAQWLMAD GHMPERYLAS QGLCLGRAGQ VHLERDAQGQ VWVGGDSVTC
IDGQVMLGSN